RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 DUS1LQ6P1R4 473 aaKnown RBP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 TRMT11Q7Z4G4 463 aaKnown RBP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 HDDC2Q7Z4H3 204 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 CCDC28AQ8IWP9 274 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 BRINP2Q9C0B6 783 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 SLA2Q9H6Q3 261 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 ITM2CQ9NQX7 267 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 PSIP1O75475 530 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 TNNI3P19429 210 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 ADRA1AP35348 466 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 SOX4Q06945 474 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 CRTC2Q53ET0 693 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 DESI1Q6ICB0 168 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 FUNDC1Q8IVP5 155 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 PCSK9Q8NBP7 692 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 ADAMTS16Q8TE57 1224 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 MRPL39Q9NYK5 338 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 MOSPD1Q9UJG1 213 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 OAS3Q9Y6K5 1087 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 MITFO75030 526 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 WBP4O75554 376 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 MAB21L1Q13394 359 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 RFTN2Q52LD8 501 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 C10orf62Q5T681 223 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 FRG2Q64ET8 278 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 CXXC5Q7LFL8 322 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 SLC22A17Q8WUG5 538 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 FRG2BQ96QU4 278 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 BBS4Q96RK4 519 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 TP63Q9H3D4 680 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 ZNF385DQ9H6B1 395 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 TPT1P8Q9HAU6 139 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 HEBP1Q9NRV9 189 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 C14orf119Q9NWQ9 140 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 VPS29Q9UBQ0 182 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 ANKRD66B4E2M5 251 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 CXCR2P25025 360 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 NTSP30990 170 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 BHLHB9Q6PI77 547 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 MSANTD1Q6ZTZ1 278 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 UBE2J2Q8N2K1 259 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 KRTCAP2Q8N6L1 136 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 GPR78Q96P69 363 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 MS4A12Q9NXJ0 267 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 GMPR2Q9P2T1 348 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 GTF2IRD1Q9UHL9 959 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 KIAA0513O60268 411 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 CLTBP09497 229 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 HOXA11P31270 313 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 KDELR2P33947 212 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 RIPPLY1Q0D2K3 151 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 KRT74Q7RTS7 529 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 RGL4Q8IZJ4 473 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 GFM1Q96RP9 751 aaKnown RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 C11orf84Q9BUA3 381 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 ASPNQ9BXN1 380 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 ZDHHC6Q9H6R6 413 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 PAQR5Q9NXK6 330 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-203ENST00000540357 PRELID1Q9Y255 219 aa12.67□□□□□ -0.38
DNMT1-203ENST00000540357 PRMT3O60678 531 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 GABARAPO95166 117 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 BMP4P12644 408 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 GADD45AP24522 165 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 NR4A2P43354 598 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 RPS3AP61247 264 aaKnown RBP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 CYP4F8P98187 520 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 E2F2Q14209 437 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 RNF180Q86T96 592 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 ATAD1Q8NBU5 361 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 ZNF671Q8TAW3 534 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 SETD6Q8TBK2 473 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 BPIFB1Q8TDL5 484 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 TIFAQ96CG3 184 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 C16orf70Q9BSU1 422 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 ATG10Q9H0Y0 220 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 MIR1-1HGQ9H1L0 117 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 OARD1Q9Y530 152 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 NT5C1B-RDH14C9J2C7 533 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 SLC28A2O43868 658 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 CORO1AP31146 461 aaKnown RBP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 ERVPABLB-1P60509 514 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 FGD2Q7Z6J4 655 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 OR52B6Q8NGF0 335 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 CCDC115Q96NT0 180 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 SEC14L3Q9UDX4 400 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 ZBTB42B2RXF5 422 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 ARHGEF15O94989 841 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 BCKDHAP12694 445 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 C2orf80Q0P641 193 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 PCBP2Q15366 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 CAPN13Q6MZZ7 669 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 MED27Q6P2C8 311 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 B3GNT8Q7Z7M8 397 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 FAM46DQ8NEK8 389 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms