RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SMIM31A0A1B0GVY4 71 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 H0Y8X5 98 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 AIM2O14862 343 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 PDYNP01213 254 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 HSD3B1P14060 373 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 NPPBP16860 134 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 HSD3B2P26439 372 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 NUDT2P50583 147 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 DIO3P55073 304 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 SLC25A3Q00325 362 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 CSTF3Q12996 717 aaKnown RBP16.32■□□□□ 0.2
COPS3-212ENST00000539941 FOXB2Q5VYV0 432 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 SLCO4C1Q6ZQN7 724 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 BMP8AQ7Z5Y6 402 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 ZFAND4Q86XD8 727 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 ALDH16A1Q8IZ83 802 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 RCN3Q96D15 328 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 REPS1Q96D71 796 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 PDXPQ96GD0 296 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 INSM2Q96T92 566 aaPredicted RBP16.32■□□□□ 0.2
COPS3-212ENST00000539941 HBEGFQ99075 208 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 ZNF184Q99676 751 aaPredicted RBP16.32■□□□□ 0.2
COPS3-212ENST00000539941 EFCAB11Q9BUY7 163 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 RAB11FIP5Q9BXF6 653 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 MRPL1Q9BYD6 325 aaKnown RBP16.32■□□□□ 0.2
COPS3-212ENST00000539941 EPB41L1Q9H4G0 881 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 TBC1D17Q9HA65 648 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 LRTM1Q9HBL6 345 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 FARSBQ9NSD9 589 aaKnown RBP16.32■□□□□ 0.2
COPS3-212ENST00000539941 C1orf109Q9NX04 203 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 STX18Q9P2W9 335 aaKnown RBP16.32■□□□□ 0.2
COPS3-212ENST00000539941 TDRKHQ9Y2W6 561 aaKnown RBP16.32■□□□□ 0.2
COPS3-212ENST00000539941 PCDHGA11Q9Y5H2 935 aa16.32■□□□□ 0.2
COPS3-212ENST00000539941 IGHV1OR15-9A0A0B4J2B8 117 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 A0A1B0GVG6 124 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 ACPPP15309 386 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 CD1EP15812 388 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 CD22P20273 847 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
COPS3-212ENST00000539941 ART3Q13508 389 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 LAPTM5Q13571 262 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 LIN52Q52LA3 116 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 SGO1Q5FBB7 561 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 COQ5Q5HYK3 327 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 PAGE2BQ5JRK9 111 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 PRAMEF14Q5SWL7 426 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 PRAMEF13Q5VWM6 474 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 ATG9BQ674R7 924 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 Q6ZSR6 202 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 FUNDC1Q8IVP5 155 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 WDR20Q8TBZ3 569 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 SLC5A11Q8WWX8 675 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 STMN2Q93045 179 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 NEIL2Q969S2 332 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 BIRC7Q96CA5 298 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 FERD3LQ96RJ6 166 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 ACPTQ9BZG2 426 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 TRNAU1APQ9NX07 287 aaKnown RBP16.31■□□□□ 0.2
COPS3-212ENST00000539941 PRPF19Q9UMS4 504 aaKnown RBP16.31■□□□□ 0.2
COPS3-212ENST00000539941 EIF3LQ9Y262 564 aaKnown RBP16.31■□□□□ 0.2
COPS3-212ENST00000539941 PLEKHM1Q9Y4G2 1056 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 WDFY4Q6ZS81 3184 aa16.31■□□□□ 0.2
COPS3-212ENST00000539941 DYTNA2CJ06 578 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 TMEM221A6NGB7 291 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 PDZK1P1A8MUH7 402 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 M0R296 226 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 MAP3K13O43283 966 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 KDM1AO60341 852 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 NRP2O60462 931 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 SLC2A4P14672 509 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 SRP54P61011 504 aaKnown RBP16.3■□□□□ 0.2
COPS3-212ENST00000539941 TPRG1LQ5T0D9 272 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 BLOC1S3Q6QNY0 202 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 ABRAXAS1Q6UWZ7 409 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 HACD2Q6Y1H2 254 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 SCUBE1Q8IWY4 988 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 DEFB107AQ8IZN7 70 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 FAM9CQ8IZT9 166 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 DSELQ8IZU8 1212 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 PGAM4Q8N0Y7 254 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 CAMKK1Q8N5S9 505 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 PJA1Q8NG27 643 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 OR9I1Q8NGQ6 314 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 SMPDL3AQ92484 453 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 CMTM7Q96FZ5 175 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 METTL2AQ96IZ6 378 aaKnown RBP16.3■□□□□ 0.2
COPS3-212ENST00000539941 IER2Q9BTL4 223 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 THTPAQ9BU02 230 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 MENTQ9BUN1 341 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 C1orf50Q9BV19 199 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 DENND2DQ9H6A0 471 aaPredicted RBP16.3■□□□□ 0.2
COPS3-212ENST00000539941 BRF2Q9HAW0 419 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 GPR27Q9NS67 375 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 PCOLCE2Q9UKZ9 415 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.3■□□□□ 0.2
COPS3-212ENST00000539941 NDUFAF1Q9Y375 327 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 TMED5Q9Y3A6 229 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 CFAP20Q9Y6A4 193 aaKnown RBP16.3■□□□□ 0.2
COPS3-212ENST00000539941 DGKBQ9Y6T7 804 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 A0A1W2PPC4 97 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms