RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CYHR1Q6ZMK1 362 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 GDPGP1Q6ZNW5 385 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF367Q7RTV3 350 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 DNAAF3Q8N9W5 541 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 WDR36Q8NI36 951 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SETD7Q8WTS6 366 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 MRPL48Q96GC5 212 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 PPP3R2Q96LZ3 170 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 C3orf30Q96M34 536 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 ERMAPQ96PL5 475 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 CD244Q9BZW8 370 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 GABARAPL1Q9H0R8 117 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SPASTQ9UBP0 616 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF222Q9UK12 451 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 PAPPAQ13219 1627 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 PMS2P1A4D2B8 440 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 CLCA1A8K7I4 914 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 F5H423 210 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 LYRM1O43325 122 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 ATG7O95352 703 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 MPC2O95563 127 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 C1RP00736 705 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC2A2P11168 524 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 HGFP14210 728 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 PFKLP17858 780 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 TSPAN8P19075 237 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 STOMP27105 288 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 INPP1P49441 399 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 GTF2A2P52657 109 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 PRMT2P55345 433 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 GPR17Q13304 367 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 TP53BP2Q13625 1128 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 MXD4Q14582 209 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 EIF4HQ15056 248 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SMAD2Q15796 467 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 KYAT1Q16773 422 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SH3PXD2AQ5TCZ1 1133 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 KANK2Q63ZY3 851 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC39A4Q6P5W5 647 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SPATA19Q7Z5L4 167 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 CYP4Z1Q86W10 505 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 C12orf40Q86WS4 652 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC41A1Q8IVJ1 513 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 KRT78Q8N1N4 520 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 OR52E4Q8NGH9 312 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 USP7Q93009 1102 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 UPRTQ96BW1 309 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 MYO19Q96H55 970 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 CELF6Q96J87 481 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 TMEM175Q9BSA9 504 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 MED18Q9BUE0 208 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 RBCK1Q9BYM8 510 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 OR51M1Q9H341 326 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 TFCP2L1Q9NZI6 479 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 EPHA6Q9UF33 1036 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 STUB1Q9UNE7 303 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 PCDHGB7Q9Y5F8 929 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC22A7Q9Y694 548 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 FOCADQ5VW36 1801 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 DOT1LQ8TEK3 1739 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 GLYATL1P3A0A0U1RQE8 302 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 NEMP2A6NFY4 417 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 A8MT66 165 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC28A1O00337 649 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 PITPNM1O00562 1244 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 ZBTB24O43167 697 aaPredicted RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 AKAP8O43823 692 aaKnown RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 WBP4O75554 376 aaKnown RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 HLA-DQB1P01920 261 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 APOC3P02656 99 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 FHP07954 510 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 ADRB1P08588 477 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 CTPS1P17812 591 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 CYP2F1P24903 491 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 RPS19P39019 145 aaKnown RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 TGM4P49221 684 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 CLCN3P51790 818 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 IFRD2Q12894 506 aaPredicted RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 SNAPC1Q16533 368 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 FAM102AQ5T9C2 384 aaPredicted RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 ENPP6Q6UWR7 440 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 TMEM179BQ7Z7N9 219 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 OR6C4Q8NGE1 309 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 GPR152Q8TDT2 470 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 DNASE1L2Q92874 299 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 PGAP3Q96FM1 320 aaPredicted RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 RTP3Q9BQQ7 232 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 SYNDIG1Q9H7V2 258 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 CISHQ9NSE2 258 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 FZD1Q9UP38 647 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 UBA6A0AVT1 1052 aaPredicted RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 SOWAHBA6NEL2 793 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 ARGFXA6NJG6 315 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 C2orf74A8MZ97 194 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 PPP6CO00743 305 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC22A3O75751 556 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 DHFRP00374 187 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 HBQ1P09105 142 aa8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 NCF1P14598 390 aaPredicted RBP8.29□□□□□ -1.08
SRGAP1-202ENST00000537556 HOXA13P31271 388 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms