RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 OR2L3Q8NG85 312 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 SMPDL3AQ92484 453 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 GBP5Q96PP8 586 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 GPR21Q99679 349 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 C17orf62Q9BQA9 187 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ERP44Q9BS26 406 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 TRIM51Q9BSJ1 452 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 PHACTR1Q9C0D0 580 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 SPRTNQ9H040 489 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 IARS2Q9NSE4 1012 aaKnown RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ASF1BQ9NVP2 202 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 WHRNQ9P202 907 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 C5AR2Q9P296 337 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ZC3H7BQ9UGR2 993 aaKnown RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ERRFI1Q9UJM3 462 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 RUVBL2Q9Y230 463 aaKnown RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 PADI2Q9Y2J8 665 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ITPR2Q14571 2701 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 DOPEY1Q5JWR5 2465 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 OR2A25A4D2G3 310 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 E7ENX8 843 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 SLC16A5O15375 505 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 ZBTB14O43829 449 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 VPS26AO75436 327 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 BANF1O75531 89 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 BDKRB1P46663 353 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 RPL21P46778 160 aaKnown RBP11.91□□□□□ -0.5
PRKDC-207ENST00000536483 ARSFP54793 590 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 EMP3P54852 163 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 TAP2Q03519 686 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 PRDX1Q06830 199 aaKnown RBP11.91□□□□□ -0.5
PRKDC-207ENST00000536483 SSPNQ14714 243 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 TCTE1Q5JU00 501 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 VWA5B1Q5TIE3 1220 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 C1orf189Q5VU69 101 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 DUPD1Q68J44 220 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 MAMDC2Q7Z304 686 aaPredicted RBP11.91□□□□□ -0.5
PRKDC-207ENST00000536483 MRGPREQ86SM8 312 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 IQCKQ8N0W5 287 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 ZNF480Q8WV37 535 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 SKA2Q8WVK7 121 aaPredicted RBP11.91□□□□□ -0.5
PRKDC-207ENST00000536483 N4BP2L2Q92802 583 aaPredicted RBP11.91□□□□□ -0.5
PRKDC-207ENST00000536483 NACC2Q96BF6 587 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 PDLIM5Q96HC4 596 aaKnown RBP11.91□□□□□ -0.5
PRKDC-207ENST00000536483 FER1L6-AS2Q96M78 137 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 KRT12Q99456 494 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 PKP4Q99569 1192 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 MCMBPQ9BTE3 642 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 TAS2R13Q9NYV9 303 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 B3GNT3Q9Y2A9 372 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 PTRH2Q9Y3E5 179 aaKnown RBP11.91□□□□□ -0.5
PRKDC-207ENST00000536483 CENPEQ02224 2701 aa11.91□□□□□ -0.5
PRKDC-207ENST00000536483 WIPF3A6NGB9 483 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 MASP2O00187 686 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 EIF3HO15372 352 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CTSVO60911 334 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CBX6O95503 412 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CLDN1O95832 211 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 TSPAN12O95859 305 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 SLC16A8O95907 504 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 LDLRP01130 860 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CTSBP07858 339 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CASQ1P31415 396 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CARSP49589 748 aaKnown RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 FOXL2P58012 376 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 ABATP80404 500 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 DCDP81605 110 aaKnown RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 SP140Q13342 867 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 FASTKQ14296 549 aaKnown RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 MYBPC3Q14896 1274 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 DEFB110Q30KQ9 67 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 DCAF10Q5QP82 559 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 ZNF425Q6IV72 752 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 MRPL14Q6P1L8 145 aaKnown RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 FBXO42Q6P3S6 717 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 RNF44Q7L0R7 432 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 FAM20CQ8IXL6 584 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 C17orf53Q8N3J3 647 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 GALNT16Q8N428 558 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 C2orf73Q8N5S3 287 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CLEC1AQ8NC01 280 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 ANKRD7Q92527 254 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 DLG3Q92796 817 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 FAM136AQ96C01 138 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 PWWP2AQ96N64 755 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 IP6K3Q96PC2 410 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 SLC26A1Q9H2B4 701 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 ZNF552Q9H707 407 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 CIDEBQ9UHD4 219 aa11.9□□□□□ -0.5
PRKDC-207ENST00000536483 GPN3Q9UHW5 284 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-207ENST00000536483 UQCRHLA0A096LP55 91 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 IGKV1-8A0A0C4DH67 115 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 PEX12O00623 359 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 ALBP02768 609 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 C8GP07360 202 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 UQCRHP07919 91 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 F7P08709 466 aaPredicted RBP11.89□□□□□ -0.51
PRKDC-207ENST00000536483 FDXRP22570 491 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 HRH2P25021 359 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms