RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 KIAA1211LQ6NV74 962 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 GPR180Q86V85 440 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 RIMKLAQ8IXN7 391 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 CXorf40BQ96DE9 158 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 SIPA1Q96FS4 1042 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 APIPQ96GX9 242 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 APOLD1Q96LR9 279 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 CCDC115Q96NT0 180 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 HHIPQ96QV1 700 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 NR1H4Q96RI1 486 aaPredicted RBP12.95□□□□□ -0.34
BEST1-208ENST00000534553 LGR4Q9BXB1 951 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 RAB11FIP5Q9BXF6 653 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 Q9H521 79 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 MBNL1Q9NR56 388 aaKnown RBP12.95□□□□□ -0.34
BEST1-208ENST00000534553 SLC17A4Q9Y2C5 497 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 DLGAP4Q9Y2H0 992 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 DTNAQ9Y4J8 743 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 TICRRQ7Z2Z1 1910 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 A0A096LPI6 279 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 DHRS12A0PJE2 317 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 KRT87PA6NCN2 255 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 ANTXRLA6NF34 631 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 KDM1AO60341 852 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 ADAM23O75077 832 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 EGFP01133 1207 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 ACADMP11310 421 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 PIK3CBP42338 1070 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 DGKQP52824 942 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 KLC1Q07866 573 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 MTAPQ13126 283 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 PON2Q15165 354 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 CYP2A13Q16696 494 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 GRAMD1BQ3KR37 738 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 RABL3Q5HYI8 236 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 LRIF1Q5T3J3 769 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 GALNT18Q6P9A2 607 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 NXPE4Q6UWF7 544 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 FAM83HQ6ZRV2 1179 aaPredicted RBP12.95□□□□□ -0.34
BEST1-208ENST00000534553 SYT12Q8IV01 421 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 KRT78Q8N1N4 520 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 TMEM132CQ8N3T6 1108 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 C11orf24Q96F05 449 aaPredicted RBP12.95□□□□□ -0.34
BEST1-208ENST00000534553 SLC45A3Q96JT2 553 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 COPS7BQ9H9Q2 264 aaPredicted RBP12.95□□□□□ -0.34
BEST1-208ENST00000534553 C8orf4Q9NR00 106 aa12.95□□□□□ -0.34
BEST1-208ENST00000534553 ATP6V1B2P21281 511 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 RPL3P39023 403 aaKnown RBP12.94□□□□□ -0.34
BEST1-208ENST00000534553 KIR3DL1P43629 444 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 TRPC1P48995 793 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 ATXN3P54252 364 aaPredicted RBP12.94□□□□□ -0.34
BEST1-208ENST00000534553 MRPS35P82673 323 aaKnown RBP12.94□□□□□ -0.34
BEST1-208ENST00000534553 FGL2Q14314 439 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 THEMIS2Q5TEJ8 643 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 LPCAT4Q643R3 524 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 CAPRIN2Q6IMN6 1127 aaKnown RBP12.94□□□□□ -0.34
BEST1-208ENST00000534553 CYP2R1Q6VVX0 501 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 KBTBD2Q8IY47 623 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 OR8J2Q8NGG1 315 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 HUS1BQ8NHY5 278 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 PPM1MQ96MI6 270 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 TMEM74Q96NL1 305 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 MTERF1Q99551 399 aaKnown RBP12.94□□□□□ -0.34
BEST1-208ENST00000534553 PRPF18Q99633 342 aaKnown RBP12.94□□□□□ -0.34
BEST1-208ENST00000534553 PELI2Q9HAT8 420 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 FAM120CQ9NX05 1096 aaKnown RBP12.94□□□□□ -0.34
BEST1-208ENST00000534553 SLAMF8Q9P0V8 285 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 SLC23A2Q9UGH3 650 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 OR1A2Q9Y585 309 aa12.94□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3DA0A087WVF3 549 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3IA0A087WXS9 549 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3EA0A087X179 549 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3KA0A087X1G2 549 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 PIPSLA2A3N6 862 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3FA6NER0 549 aaPredicted RBP12.93□□□□□ -0.34
BEST1-208ENST00000534553 MAGEB17A8MXT2 336 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3LB9A6J9 549 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3HP0C7X1 549 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 PCNAP12004 261 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 KIAA1024LP59773 190 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 SLBPQ14493 270 aaKnown RBP eCLIP12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3GQ6DHY5 549 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3CQ6IPX1 549 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TICAM1Q8IUC6 712 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TBC1D3Q8IZP1 549 aaPredicted RBP12.93□□□□□ -0.34
BEST1-208ENST00000534553 KRTCAP2Q8N6L1 136 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TMEM102Q8N9M5 508 aaPredicted RBP12.93□□□□□ -0.34
BEST1-208ENST00000534553 VPS37AQ8NEZ2 397 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 OR52E4Q8NGH9 312 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 OR5AR1Q8NGP9 310 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 SMPDL3AQ92484 453 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 SCARF2Q96GP6 870 aaPredicted RBP12.93□□□□□ -0.34
BEST1-208ENST00000534553 TSSK3Q96PN8 268 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 GBP5Q96PP8 586 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 PKP2Q99959 881 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 GEMIN8Q9NWZ8 242 aaKnown RBP12.93□□□□□ -0.34
BEST1-208ENST00000534553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.93□□□□□ -0.34
BEST1-208ENST00000534553 EGFL7Q9UHF1 273 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 TRPM6Q9BX84 2022 aa12.93□□□□□ -0.34
BEST1-208ENST00000534553 UQCRBP14927 111 aa12.92□□□□□ -0.34
BEST1-208ENST00000534553 IDSP22304 550 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms