RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 Q6ZS92 163 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 LMNTD2Q8IXW0 634 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 PRSS58Q8IYP2 241 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 NAT8LQ8N9F0 302 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 FBXO15Q8NCQ5 510 aaPredicted RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 PPFIBP2Q8ND30 876 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 OR11G2Q8NGC1 345 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 PRR7Q8TB68 274 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 CALML6Q8TD86 181 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 COG1Q8WTW3 980 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 ZNF480Q8WV37 535 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 ASB11Q8WXH4 323 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 KCNJ9Q92806 393 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 INPP5DQ92835 1189 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 MIEF2Q96C03 454 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 CABS1Q96KC9 395 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 AGAP4Q96P64 663 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 GPR21Q99679 349 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 CRB3Q9BUF7 120 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 ILKAPQ9H0C8 392 aaPredicted RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 ABCF3Q9NUQ8 709 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 UTP6Q9NYH9 597 aaKnown RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 ZNF282Q9UDV7 671 aaPredicted RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 FBXO5Q9UKT4 447 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 CDC14AQ9UNH5 594 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 MED16Q9Y2X0 877 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 DHRS7Q9Y394 339 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 COPG1Q9Y678 874 aaKnown RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 SPTBP11277 2137 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 PCSK5Q92824 1860 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 IGKV1-8A0A0C4DH67 115 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 SMAPO00193 183 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 PHF2O75151 1096 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 SEMA7AO75326 666 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 CCNDBP1O95273 360 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 MPC1LP0DKB6 136 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 ENO3P13929 434 aaPredicted RBP8.49□□□□□ -1.05
COPB1-211ENST00000534234 SLC1A2P43004 574 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 MAGEA3P43357 314 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 CARSP49589 748 aaKnown RBP8.49□□□□□ -1.05
COPB1-211ENST00000534234 EMP3P54852 163 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 TUBB8Q3ZCM7 444 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 HSP90AA5PQ58FG0 334 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 VWA2Q5GFL6 755 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 THEMIS2Q5TEJ8 643 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 ICE2Q659A1 982 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 ZNF425Q6IV72 752 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 LAPTM4BQ86VI4 370 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 PAQR7Q86WK9 346 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 AGGF1Q8N302 714 aaeCLIP8.49□□□□□ -1.05
COPB1-211ENST00000534234 GIMAP7Q8NHV1 300 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 DNAJB14Q8TBM8 379 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 ACTRT1Q8TDG2 376 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 GRK7Q8WTQ7 553 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 SSC4DQ8WTU2 575 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 THOC3Q96J01 351 aaKnown RBP8.49□□□□□ -1.05
COPB1-211ENST00000534234 C10orf90Q96M02 699 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 OR2A5Q96R48 311 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 OSBPL9Q96SU4 736 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 MESP1Q9BRJ9 268 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 YIPF2Q9BWQ6 316 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 LHPPQ9H008 270 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 C3orf18Q9UK00 162 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 COMMD10Q9Y6G5 202 aa8.49□□□□□ -1.05
COPB1-211ENST00000534234 IGLV3-12A0A075B6K2 115 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 CBX6O95503 412 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 ACPPP15309 386 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 FBLP22087 321 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 FNTAP49354 379 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 ABATP80404 500 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 RELAQ04206 551 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 NR6A1Q15406 480 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PPP1R7Q15435 360 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 HIF1AQ16665 826 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 HKDC1Q2TB90 917 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 CRB2Q5IJ48 1285 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 ATG9BQ674R7 924 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 IGFL2Q6UWQ7 119 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 UBE2R2Q712K3 238 aaPredicted RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 ADCK2Q7Z695 626 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 CUZD1Q86UP6 607 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PPIL6Q8IXY8 311 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 LRRC56Q8IYG6 542 aaPredicted RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 SLC35F6Q8N357 371 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 CSNK1A1LQ8N752 337 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
COPB1-211ENST00000534234 CD200R1Q8TD46 325 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 RERGQ96A58 199 aaPredicted RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 C8orf44Q96CB5 159 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 MVB12AQ96EY5 273 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 MMABQ96EY8 250 aaPredicted RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 EBNA1BP2Q99848 306 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 SYNPO2LQ9H987 977 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 IARS2Q9NSE4 1012 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 CUEDC1Q9NWM3 386 aaPredicted RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 TRPC4Q9UBN4 977 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 RUVBL1Q9Y265 456 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 CSAG2Q9Y5P2 127 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms