RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 VSTM2BA6NLU5 285 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 ZNF839A8K0R7 811 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 H0YGG7 62 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 GOLGA8MH3BSY2 632 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 MAP2K7O14733 419 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 USP1O94782 785 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 DDAH2O95865 285 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 F7P08709 466 aaPredicted RBP16.99■□□□□ 0.31
PCF11-206ENST00000533018 ZGLP1P0C6A0 271 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 PNLIPRP1P54315 467 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 ARF3P61204 181 aaPredicted RBP16.99■□□□□ 0.31
PCF11-206ENST00000533018 CUL1Q13616 776 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 GBX1Q14549 363 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 ANKRD22Q5VYY1 191 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 ADCK2Q7Z695 626 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 LRRC8AQ8IWT6 810 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 PPFIBP2Q8ND30 876 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 PPP4R1Q8TF05 950 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 RERGQ96A58 199 aaPredicted RBP16.99■□□□□ 0.31
PCF11-206ENST00000533018 MAGOHBQ96A72 148 aaKnown RBP16.99■□□□□ 0.31
PCF11-206ENST00000533018 C8orf44Q96CB5 159 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 PKP4Q99569 1192 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 ZNF160Q9HCG1 818 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 ENAMQ9NRM1 1142 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 UTP6Q9NYH9 597 aaKnown RBP16.99■□□□□ 0.31
PCF11-206ENST00000533018 TAC3Q9UHF0 121 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 CDC14AQ9UNH5 594 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 NOVA2Q9UNW9 492 aaKnown RBP16.99■□□□□ 0.31
PCF11-206ENST00000533018 PCDHGA10Q9Y5H3 936 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 MAGEB16A2A368 324 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 SDR42E2A6NKP2 422 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 MYO1CO00159 1063 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 FFAR3O14843 346 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 GPR42O15529 346 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 NRDCO43847 1150 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 PSIP1O75475 530 aaKnown RBP16.98■□□□□ 0.31
PCF11-206ENST00000533018 CCNDBP1O95273 360 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 UQCRHP07919 91 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 ACPPP15309 386 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 HSD17B2P37059 387 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 CDC16Q13042 620 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 CTBP1Q13363 440 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 ARHGAP19Q14CB8 494 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 VWA2Q5GFL6 755 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 THEMIS2Q5TEJ8 643 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 TTC27Q6P3X3 843 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 LINC00696Q6ZRV3 163 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 CAND1Q86VP6 1230 aaKnown RBP16.98■□□□□ 0.31
PCF11-206ENST00000533018 REXO1L1PQ8IX06 675 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 CSNK1A1LQ8N752 337 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 MMABQ96EY8 250 aaPredicted RBP16.98■□□□□ 0.31
PCF11-206ENST00000533018 C10orf90Q96M02 699 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 PLCD4Q9BRC7 762 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 MESP1Q9BRJ9 268 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 FBXO6Q9NRD1 293 aaPredicted RBP16.98■□□□□ 0.31
PCF11-206ENST00000533018 TRPC4Q9UBN4 977 aa16.98■□□□□ 0.31
PCF11-206ENST00000533018 CRYBG3Q68DQ2 2970 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.97■□□□□ 0.31
PCF11-206ENST00000533018 FAM237BA0A1B0GVD1 139 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 PHF2O75151 1096 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 HPP00738 406 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 ANXA5P08758 320 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 CXCR2P25025 360 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 CLCN7P51798 805 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 PRDX1Q06830 199 aaKnown RBP16.97■□□□□ 0.31
PCF11-206ENST00000533018 HKDC1Q2TB90 917 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 ICE2Q659A1 982 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 ISLR2Q6UXK2 745 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 LAPTM4BQ86VI4 370 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 PAQR7Q86WK9 346 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 DENND6AQ8IWF6 608 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 C5orf34Q96MH7 638 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 SLC30A3Q99726 388 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 ERRFI1Q9UJM3 462 aaPredicted RBP16.97■□□□□ 0.31
PCF11-206ENST00000533018 RUVBL1Q9Y265 456 aaKnown RBP16.97■□□□□ 0.31
PCF11-206ENST00000533018 SLC5A6Q9Y289 635 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 NTNG1Q9Y2I2 539 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 MAD1L1Q9Y6D9 718 aa16.97■□□□□ 0.31
PCF11-206ENST00000533018 ZGRF1Q86YA3 2104 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 NSG1A0A0A6YYJ2 146 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 PRPF4O43172 522 aaKnown RBP eCLIP16.96■□□□□ 0.312e-8■■□□□ 14.2
PCF11-206ENST00000533018 KIF5CO60282 957 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 SLC16A8O95907 504 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 ERGP11308 486 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 MLNP12872 115 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 MAGEA6P43360 314 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 EMP2P54851 167 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 Q0VFX4 171 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 ZNF169Q14929 603 aaPredicted RBP16.96■□□□□ 0.31
PCF11-206ENST00000533018 PRTGQ2VWP7 1150 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 CRB2Q5IJ48 1285 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 ARMC3Q5W041 872 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 FAAH2Q6GMR7 532 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 KBTBD2Q8IY47 623 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 COG1Q8WTW3 980 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 MS4A14Q96JA4 679 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 SERPINB12Q96P63 405 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 XAB2Q9HCS7 855 aaKnown RBP16.96■□□□□ 0.31
PCF11-206ENST00000533018 C20orf96Q9NUD7 363 aaPredicted RBP16.96■□□□□ 0.31
PCF11-206ENST00000533018 PCYOX1Q9UHG3 505 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms