RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 UGT3A1Q6NUS8 523 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 COX15Q7KZN9 410 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 PPIL6Q8IXY8 311 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 NAT8LQ8N9F0 302 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 INPP5DQ92835 1189 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 MS4A14Q96JA4 679 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 EBNA1BP2Q99848 306 aaKnown RBP13.56□□□□□ -0.24
CAPN1-212ENST00000527887 DPH7Q9BTV6 452 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 CUEDC1Q9NWM3 386 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-212ENST00000527887 ZNF282Q9UDV7 671 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-212ENST00000527887 A0A0J9YVX5 310 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 GFYI3L273 518 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 SOCS6O14544 535 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 TTC4O95801 387 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 GNLYP22749 145 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 HRH2P25021 359 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 MCM3P25205 808 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 CTBP1Q13363 440 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 PTK6Q13882 451 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 PLEKHN1Q494U1 663 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-212ENST00000527887 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.55□□□□□ -0.24
CAPN1-212ENST00000527887 FRMPD2BQ6IN97 320 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 KIRREL2Q6UWL6 708 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 PCGF5Q86SE9 256 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 SIGLEC10Q96LC7 697 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 RUNDC3BQ96NL0 473 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 PSMG3-AS1Q96PY0 264 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 PKP4Q99569 1192 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 FAM167BQ9BTA0 163 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 NAT9Q9BTE0 207 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 C20orf96Q9NUD7 363 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-212ENST00000527887 GALPQ9UBC7 116 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 FBXL4Q9UKA2 621 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 MED13Q9UHV7 2174 aa13.55□□□□□ -0.24
CAPN1-212ENST00000527887 IGLV3-12A0A075B6K2 115 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 LOC105369274A0A096LPK9 316 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 LOC102723532A0A0G2JNH3 316 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 E7ENX8 843 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 H0YGG7 62 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 GOLGA8MH3BSY2 632 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 SLC16A8O95907 504 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 EZRP15311 586 aaKnown RBP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ITGA3P26006 1051 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 SKIV2L2P42285 1042 aaKnown RBP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 OR1D4P47884 311 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ARF3P61204 181 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 TAP2Q03519 686 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 RAPSNQ13702 412 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 RBBP7Q16576 425 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 TUBB8Q3ZCM7 444 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 AGAP7PQ5VUJ5 663 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ICE2Q659A1 982 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ZNF425Q6IV72 752 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 SUSD1Q6UWL2 747 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 IGFL2Q6UWQ7 119 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 CYHR1Q6ZMK1 362 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 Q6ZS92 163 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 PAQR7Q86WK9 346 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 DENND6AQ8IWF6 608 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 OR4N4Q8N0Y3 316 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 STT3BQ8TCJ2 826 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ZNF480Q8WV37 535 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 RERGQ96A58 199 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 FAM136AQ96C01 138 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 MIEF2Q96C03 454 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 CAPZA3Q96KX2 299 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 AGAP4Q96P64 663 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 CRB3Q9BUF7 120 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ACAT2Q9BWD1 397 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 LHPPQ9H008 270 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ILKAPQ9H0C8 392 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 PCBD2Q9H0N5 130 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 SLC6A20Q9NP91 592 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 FBXO6Q9NRD1 293 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-212ENST00000527887 FBXO5Q9UKT4 447 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 MED16Q9Y2X0 877 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 MAD1L1Q9Y6D9 718 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 NAV2Q8IVL1 2488 aa13.54□□□□□ -0.24
CAPN1-212ENST00000527887 ZGLP1P0C6A0 271 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 SLC1A2P43004 574 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 RGS4P49798 205 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 DSG2Q14126 1118 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 PPP1R7Q15435 360 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
CAPN1-212ENST00000527887 ZNF549Q6P9A3 640 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 CSNK1A1LQ8N752 337 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 OR11G2Q8NGC1 345 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 PPP4R1Q8TF05 950 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 SLCO2A1Q92959 643 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 SNRNP40Q96DI7 357 aaKnown RBP13.53□□□□□ -0.24
CAPN1-212ENST00000527887 CABS1Q96KC9 395 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 OR2A5Q96R48 311 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms