RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 NRAPQ86VF7 1730 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 TRAV6A0A075B6T7 132 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 A8MV72 311 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-216ENST00000527467 MAP2K7O14733 419 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 LCMT2O60294 686 aaKnown RBP7.08□□□□□ -1.28
CTNND1-216ENST00000527467 POMCP01189 267 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 ITGAVP06756 1048 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 ACVR2AP27037 513 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 PEX2P28328 305 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 POLR2JP52435 117 aaKnown RBP7.08□□□□□ -1.28
CTNND1-216ENST00000527467 MAP4K2Q12851 820 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 UBXN2BQ14CS0 331 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 PLPP4Q5VZY2 271 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 FAM198BQ6UWH4 519 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 GK5Q6ZS86 529 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 WDR53Q7Z5U6 358 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-216ENST00000527467 ZDHHC17Q8IUH5 632 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 CNTD1Q8N815 330 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 PIWIL1Q96J94 861 aaKnown RBP7.08□□□□□ -1.28
CTNND1-216ENST00000527467 MAELQ96JY0 434 aaKnown RBP7.08□□□□□ -1.28
CTNND1-216ENST00000527467 ZNF347Q96SE7 839 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 TARS2Q9BW92 718 aaKnown RBP7.08□□□□□ -1.28
CTNND1-216ENST00000527467 LACRTQ9GZZ8 138 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 PPIL3Q9H2H8 161 aaKnown RBP7.08□□□□□ -1.28
CTNND1-216ENST00000527467 XPNPEP1Q9NQW7 623 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 SNTG2Q9NY99 539 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 ACTR10Q9NZ32 417 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 STXBP5LQ9Y2K9 1186 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 COL1A2P08123 1366 aa7.08□□□□□ -1.28
CTNND1-216ENST00000527467 APOC4-APOC2K7ER74 178 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 FPGTO14772 594 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 MT-CO2P00403 227 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 APOC2P02655 101 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 TNFRSF8P28908 595 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 MSX2P35548 267 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 NPTX1Q15818 432 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 KCTD19Q17RG1 926 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 METTL21CQ5VZV1 264 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 EFCAB12Q6NXP0 572 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 GPR149Q86SP6 731 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 SGMS1Q86VZ5 419 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 CPNE9Q8IYJ1 553 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 CPA6Q8N4T0 437 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 JAGN1Q8N5M9 183 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 TSEN2Q8NCE0 465 aaKnown RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 OR5K1Q8NHB7 308 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 RPLP0P6Q8NHW5 317 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PPTC7Q8NI37 304 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 LRTOMTQ8WZ04 291 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PPM1MQ96MI6 270 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 NPLQ9BXD5 320 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 BEX2Q9BXY8 128 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 ABCG8Q9H221 673 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 BEX1Q9HBH7 125 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 TMEM9Q9P0T7 183 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 SLC7A8Q9UHI5 535 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PPP1R3GB7ZBB8 358 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 STK17BO94768 372 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 ANXA8P13928 327 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 SSR2P43308 183 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 GNPDA1P46926 289 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 LHX1P48742 406 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 TUBP50607 506 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 TAS2R50P59544 299 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PEX6Q13608 980 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PGM2L1Q6PCE3 622 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 SMARCD3Q6STE5 483 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 HFE2Q6ZVN8 426 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 TMPRSS7Q7RTY8 843 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PSTKQ8IV42 348 aaKnown RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 SLC22A15Q8IZD6 547 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 ADGRF2Q8IZF7 708 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 BEST3Q8N1M1 668 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 RBM15BQ8NDT2 890 aaKnown RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 MYLIPQ8WY64 445 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 HYLS1Q96M11 299 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 ALPK1Q96QP1 1244 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 ASB8Q9H765 288 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 KCNJ16Q9NPI9 418 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 GPATCH2Q9NW75 528 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 TBX20Q9UMR3 447 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 SLC19A2O60779 497 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 EDNRAP25101 427 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PRDX6P30041 224 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 MMP13P45452 471 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 TBX4P57082 545 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 MFSD13AQ14CX5 517 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 NFE2Q16621 373 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 IFI44LQ53G44 452 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 PARGQ86W56 976 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 RALGPS2Q86X27 583 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 HJURPQ8NCD3 748 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 OR6K6Q8NGW6 343 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 ZFAND2BQ8WV99 257 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 ITPKCQ96DU7 683 aa7.07□□□□□ -1.28
CTNND1-216ENST00000527467 BSCL2Q96G97 398 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-216ENST00000527467 MAP3K14Q99558 947 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms