RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 ART1P52961 327 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 ARF3P61204 181 aaPredicted RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 LSM11P83369 360 aaKnown RBP eCLIP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 PCOLCEQ15113 449 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 PARP6Q2NL67 630 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 FBXO42Q6P3S6 717 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 TMEM205Q6UW68 189 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 Q6ZPB1 254 aaPredicted RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 RNF44Q7L0R7 432 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 EID3Q8N140 333 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 AMER2Q8N7J2 671 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 OR2L3Q8NG85 312 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 SKA2Q8WVK7 121 aaPredicted RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 METTL21AQ8WXB1 218 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 RAD51AP1Q96B01 352 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 SDCCAG3Q96C92 435 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 MVB12AQ96EY5 273 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 MMABQ96EY8 250 aaPredicted RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 IMMP1LQ96LU5 166 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 C10orf90Q96M02 699 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 DNAJC7Q99615 494 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 FAM118BQ9BPY3 351 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 ZFYVE21Q9BQ24 234 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 CARD6Q9BX69 1037 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 TGIF2Q9GZN2 237 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 MKKSQ9NPJ1 570 aaPredicted RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 KLHL1Q9NR64 748 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 PIH1D1Q9NWS0 290 aaKnown RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 COQ3Q9NZJ6 369 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 INTUQ9ULD6 942 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 MKL2Q9ULH7 1088 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 TTC7AQ9ULT0 858 aaPredicted RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 NPIPA1Q9UND3 350 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 KLK4Q9Y5K2 254 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 MRFAP1Q9Y605 127 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 PCNX1Q96RV3 2341 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 LOC102723996A0A087X1L8 192 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 MROH6A6NGR9 719 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 IQCF5A8MTL0 148 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 PRRG2O14669 202 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 PSMD3O43242 534 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 ASNA1O43681 348 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 NRP2O60462 931 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 ZNF189O75820 626 aaPredicted RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 SEC24DO94855 1032 aaPredicted RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 SLCO2B1O94956 709 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 GAS8O95995 478 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 GOT2P00505 430 aaKnown RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 TPM1P09493 284 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 C8orf89P0DMQ9 161 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 CD99P14209 185 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 CD46P15529 392 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 EEF1DP29692 281 aaKnown RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 CMPK1P30085 196 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 SLC26A3P40879 764 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 COPS2P61201 443 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 TUBA3CQ13748 450 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 TRIM14Q14142 442 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 NAA25Q14CX7 972 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 TMED2Q15363 201 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 PRTGQ2VWP7 1150 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 BTBD16Q32M84 506 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 CCDC38Q502W7 563 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 FASTKD1Q53R41 847 aaKnown RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 ACER2Q5QJU3 275 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 MFSD4BQ5TF39 518 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 KCTD11Q693B1 232 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 FCRLBQ6BAA4 426 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 CAVIN1Q6NZI2 390 aaKnown RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 LRRC8BQ6P9F7 803 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 TUBA3EQ6PEY2 450 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 AFTPHQ6ULP2 937 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 C3P1Q6ZMU1 363 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 NCCRP1Q6ZVX7 275 aaPredicted RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 KRT222Q8N1A0 295 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 BEST3Q8N1M1 668 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 CSNK1A1LQ8N752 337 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 DNAAF3Q8N9W5 541 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 TMEM178AQ8NBL3 297 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 OR2A1Q8NGT9 310 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 OR4L1Q8NH43 312 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 AGAP11Q8TF27 550 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 PHF10Q8WUB8 498 aaKnown RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 KRT35Q92764 455 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 HDAC10Q969S8 669 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 MRFAP1L1Q96HT8 127 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 SIGLEC12Q96PQ1 595 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 UTP23Q9BRU9 249 aaKnown RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 DPH7Q9BTV6 452 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 ACAT2Q9BWD1 397 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 HES7Q9BYE0 225 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 OSBPL8Q9BZF1 889 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 KCNK13Q9HB14 408 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 ABHD10Q9NUJ1 306 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 ANKRD10Q9NXR5 420 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 ANAPC5Q9UJX4 755 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 PPT2Q9UMR5 302 aa7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 RUVBL1Q9Y265 456 aaKnown RBP7.52□□□□□ -1.21
NSMCE2-213ENST00000523824 PCDHGB6Q9Y5F9 930 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms