RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PLA2G3Q9NZ20 509 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 ATXN10Q9UBB4 475 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 TRIM10Q9UDY6 481 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 EPHA6Q9UF33 1036 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 DNAJC12Q9UKB3 198 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 FZD10Q9ULW2 581 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 PCDHGB6Q9Y5F9 930 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 COL6A5A8TX70 2615 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 CSPG4Q6UVK1 2322 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 UBE2QL1A1L167 161 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 TLCD2A6NGC4 264 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 ARHGAP42A6NI28 874 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 CCL21O00585 134 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 LDB2O43679 373 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 FAM155BO75949 473 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 MTA2O94776 668 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 IPO13O94829 963 aaKnown RBP6.11□□□□□ -1.43
VPS13B-211ENST00000522802 KLK3P07288 261 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-211ENST00000522802 CAPN3P20807 821 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 MMP8P22894 467 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 IL4RP24394 825 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 ARCN1P48444 511 aaKnown RBP6.11□□□□□ -1.43
VPS13B-211ENST00000522802 HSD11B2P80365 405 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 IL10RBQ08334 325 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 PTP4A2Q12974 167 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 IHHQ14623 411 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 RFTN1Q14699 578 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-211ENST00000522802 ODF1Q14990 250 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 CA9Q16790 459 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 EXOC3L4Q17RC7 722 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 INSCQ1MX18 579 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 TDRD12Q587J7 1177 aaKnown RBP6.11□□□□□ -1.43
VPS13B-211ENST00000522802 HENMT1Q5T8I9 393 aaKnown RBP6.11□□□□□ -1.43
VPS13B-211ENST00000522802 ERICH6BQ5W0A0 696 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 ZNF324BQ6AW86 544 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-211ENST00000522802 SCYL2Q6P3W7 929 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 GBP6Q6ZN66 633 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 PPP1R32Q7Z5V6 425 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 ZNF547Q8IVP9 402 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 CEP97Q8IW35 865 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 MSANTD4Q8NCY6 345 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 OR1L3Q8NH93 324 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 SLC30A5Q8TAD4 765 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 Q8TCH9 128 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 PIH1D2Q8WWB5 315 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 NRGNQ92686 78 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 SMARCE1Q969G3 411 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 CXorf40BQ96DE9 158 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 DHTKD1Q96HY7 919 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-211ENST00000522802 FAM81BQ96LP2 452 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 WWC2-AS2Q96NR7 200 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 GBP5Q96PP8 586 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 TAAR6Q96RI8 345 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 NUDCD1Q96RS6 583 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 MGME1Q9BQP7 344 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 TMEM121Q9BTD3 319 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 OR2AG1Q9H205 316 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 RMI1Q9H9A7 625 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 MCCC2Q9HCC0 563 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 SOHLH2Q9NX45 425 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 MAN1B1Q9UKM7 699 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 WDR37Q9Y2I8 494 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 MRFAP1Q9Y605 127 aa6.11□□□□□ -1.43
VPS13B-211ENST00000522802 AKAP6Q13023 2319 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 SEC16AO15027 2179 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 A0A0J9YYE9 177 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 A0A1W2PQ67 120 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 A0A1W2PRX2 142 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 PHF2O75151 1096 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 CNOT3O75175 753 aaKnown RBP6.1□□□□□ -1.43
VPS13B-211ENST00000522802 MTX2O75431 263 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 UNC5CO95185 931 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 CLDN7O95471 211 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 TRBC1P01850 177 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 PYGLP06737 847 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 UMODP07911 640 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 KLK2P20151 261 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 CYP2A7P20853 494 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 GPD1P21695 349 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 PBX1P40424 430 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 CA7P43166 264 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 CLCNKAP51800 687 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 KPNA2P52292 529 aaKnown RBP6.1□□□□□ -1.43
VPS13B-211ENST00000522802 FOXL1Q12952 345 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 STIM1Q13586 685 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 ICAM4Q14773 271 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 GRM7Q14831 915 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 KHDC1Q4VXA5 237 aaKnown RBP6.1□□□□□ -1.43
VPS13B-211ENST00000522802 ARMC12Q5T9G4 340 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 B3GNTL1Q67FW5 361 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-211ENST00000522802 DPY19L2P1Q6NXN4 242 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 ABRAXAS1Q6UWZ7 409 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 TRIM72Q6ZMU5 477 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 RFX8Q6ZV50 586 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 NCCRP1Q6ZVX7 275 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-211ENST00000522802 KMT5CQ86Y97 462 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 LILRA3Q8N6C8 439 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-211ENST00000522802 BCORP1Q8N888 145 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 OR8K5Q8NH50 307 aa6.1□□□□□ -1.43
VPS13B-211ENST00000522802 DNAJB14Q8TBM8 379 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms