RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 C10orf62Q5T681 223 aaPredicted RBP15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 UBAP2Q5T6F2 1119 aaKnown RBP15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 LAPTM4BQ86VI4 370 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 SLC35A5Q9BS91 424 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 HERC2P3Q9BVR0 1158 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 LRRC3Q9BY71 257 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 HRASLS2Q9NWW9 162 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 KNDC1Q76NI1 1749 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 LCHNA4D1U4 455 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 PGLSO95336 258 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 CYBAP13498 195 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 SUOXP51687 545 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 PTCHD3Q3KNS1 767 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 PLEKHS1Q5SXH7 462 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 CBR4Q8N4T8 237 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 NKX2-4Q9H2Z4 354 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 NSUN3Q9H649 340 aaKnown RBP15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 PTGES2Q9H7Z7 377 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 KLHL33A6NCF5 533 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 A8MT66 165 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 C2orf74A8MZ97 194 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 ANXA8P13928 327 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 GRIA1P42261 906 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 GMFBP60983 142 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 FBXO43Q4G163 708 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 PRRT3Q5FWE3 981 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF852Q6ZMS4 543 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 CHST4Q8NCG5 386 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 C7orf57Q8NEG2 295 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 FOXJ1Q92949 421 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 CEP295NLQ96MC4 621 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 ZSWIM3Q96MP5 696 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 CDCA3Q99618 268 aaPredicted RBP15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 DERL2Q9GZP9 239 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 ADAMTS10Q9H324 1103 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 PLOD3O60568 738 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 GJB5O95377 273 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 CFHP08603 1231 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 FOSL2P15408 326 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 FECHP22830 423 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 HRH2P25021 359 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 CXorf57Q6NSI4 855 aaKnown RBP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 ZC3HC1Q86WB0 502 aaKnown RBP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 OR56A1Q8NGH5 318 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 KCNJ9Q92806 393 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 CDK15Q96Q40 435 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 FEM1AQ9BSK4 669 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 POLR2J3Q9H1A7 115 aaKnown RBP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 METTL7AQ9H8H3 244 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 ING3Q9NXR8 418 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 DHRS7Q9Y394 339 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 TARDBPQ13148 414 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 ASTE1Q2TB18 679 aaPredicted RBP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 PARP8Q8N3A8 854 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 PNPLA2Q96AD5 504 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 LDAHQ9H6V9 325 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 FBRSQ9HAH7 460 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 MRM3Q9HC36 420 aaKnown RBP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 TPST2O60704 377 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 CBFA2T3O75081 653 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 SIX3O95343 332 aaPredicted RBP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 TIMP1P01033 207 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 ROR2Q01974 943 aaKnown RBP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 TXNRD3NBQ6F5E7 133 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 SMG8Q8ND04 991 aaKnown RBP15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF840PA6NDX5 716 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 RAB8AP61006 207 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 LMAN2Q12907 356 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 RUNX3Q13761 415 aa15.82■□□□□ 0.12
PCDHA3-201ENST00000522353 A0A1W2PP55 124 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 ADAMTS3O15072 1205 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 RAP2AP10114 183 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 MTPNP58546 118 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 TSGA13Q96PP4 275 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 MAGEE1Q9HCI5 957 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 NLE1Q9NVX2 485 aaPredicted RBP15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 ZIM2Q9NZV7 527 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 WBP11Q9Y2W2 641 aaKnown RBP15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 LTN1O94822 1766 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 FAM159BA6NKW6 160 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 PSIP1O75475 530 aaKnown RBP15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 IRF9Q00978 393 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 KCNJ11Q14654 390 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 SLC35G1Q2M3R5 365 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 KLHL22Q53GT1 634 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 PLET1Q6UQ28 207 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 IQCHQ86VS3 1027 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 OR10H4Q8NGA5 316 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 MR1Q95460 341 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 KCNH6Q9H252 994 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 ACTL8Q9H568 366 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 CHMP1AQ9HD42 196 aaPredicted RBP15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 C10orf71Q711Q0 1435 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 CLIC1O00299 241 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 GNB5O14775 395 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 EBLN1P0CF75 366 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 ACVR2AP27037 513 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 OR6K6Q8NGW6 343 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 HAVCR1Q96D42 359 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms