RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DNALI1O14645 258 aaPredicted RBP19.75■□□□□ 0.75
SDCBP-209ENST00000522243 TAP2Q03519 686 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 PRDX1Q06830 199 aaKnown RBP19.75■□□□□ 0.75
SDCBP-209ENST00000522243 DHX9Q08211 1270 aaKnown RBP19.75■□□□□ 0.75
SDCBP-209ENST00000522243 NAA25Q14CX7 972 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 RBBP7Q16576 425 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 MUM1Q2TAK8 710 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 KIRREL2Q6UWL6 708 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 PIWIL4Q7Z3Z4 852 aaKnown RBP19.75■□□□□ 0.75
SDCBP-209ENST00000522243 ADCK2Q7Z695 626 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 PAQR7Q86WK9 346 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 PARP9Q8IXQ6 854 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 LMNTD2Q8IXW0 634 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 GALNT11Q8NCW6 608 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 ASB11Q8WXH4 323 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 C10orf90Q96M02 699 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 MESP1Q9BRJ9 268 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 FAM167BQ9BTA0 163 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 KLHL42Q9P2K6 505 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 NXT1Q9UKK6 140 aaKnown RBP19.75■□□□□ 0.75
SDCBP-209ENST00000522243 SHANK1Q9Y566 2161 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 NBASA2RRP1 2371 aa19.75■□□□□ 0.75
SDCBP-209ENST00000522243 DOPEY2Q9Y3R5 2298 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 VSTM2BA6NLU5 285 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 ZNF839A8K0R7 811 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 GFYI3L273 518 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 FFAR3O14843 346 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 GPR42O15529 346 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 ZBTB14O43829 449 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 VPS26AO75436 327 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 ALPPP05187 535 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 ENO3P13929 434 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-209ENST00000522243 PGAM1P18669 254 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 HSD17B2P37059 387 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 SOX8P57073 446 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 AIMP2Q13155 320 aaKnown RBP19.74■□□□□ 0.75
SDCBP-209ENST00000522243 CRYMQ14894 314 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 HKDC1Q2TB90 917 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 PRTGQ2VWP7 1150 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 MSS51Q4VC12 460 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 THEMIS2Q5TEJ8 643 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 ZNF425Q6IV72 752 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 UBE2R2Q712K3 238 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-209ENST00000522243 CSNK1A1LQ8N752 337 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 FBXO15Q8NCQ5 510 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-209ENST00000522243 STT3BQ8TCJ2 826 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 CRB3Q9BUF7 120 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 PCYOX1Q9UHG3 505 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 RUVBL1Q9Y265 456 aaKnown RBP19.74■□□□□ 0.75
SDCBP-209ENST00000522243 COMMD10Q9Y6G5 202 aa19.74■□□□□ 0.75
SDCBP-209ENST00000522243 DOCK10Q96BY6 2186 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 CES2O00748 559 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 CCNDBP1O95273 360 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 OCA2Q04671 838 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 KLC1Q07866 573 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 PTK6Q13882 451 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 VWA2Q5GFL6 755 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 PRAMEF13Q5VWM6 474 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 PRMT9Q6P2P2 845 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 PLD3Q8IV08 490 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 LRRC56Q8IYG6 542 aaPredicted RBP19.73■□□□□ 0.75
SDCBP-209ENST00000522243 C2CD4AQ8NCU7 369 aaPredicted RBP19.73■□□□□ 0.75
SDCBP-209ENST00000522243 MIEF2Q96C03 454 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 C19orf60Q96EN9 201 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 YIPF2Q9BWQ6 316 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 SEMA3GQ9NS98 782 aa19.73■□□□□ 0.75
SDCBP-209ENST00000522243 CUEDC1Q9NWM3 386 aaPredicted RBP19.73■□□□□ 0.75
SDCBP-209ENST00000522243 ZNF282Q9UDV7 671 aaPredicted RBP19.73■□□□□ 0.75
SDCBP-209ENST00000522243 TRMT6Q9UJA5 497 aaKnown RBP19.73■□□□□ 0.75
SDCBP-209ENST00000522243 USP27XA6NNY8 438 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 TCP11X1B4DZS4 312 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 KLHL41O60662 606 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 IPO13O94829 963 aaKnown RBP19.72■□□□□ 0.75
SDCBP-209ENST00000522243 STATHP02808 62 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 ZGLP1P0C6A0 271 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 FBLP22087 321 aaKnown RBP19.72■□□□□ 0.75
SDCBP-209ENST00000522243 IMPA1P29218 277 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 BBS9Q3SYG4 887 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 TUBB8Q3ZCM7 444 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 HP1BP3Q5SSJ5 553 aaPredicted RBP19.72■□□□□ 0.75
SDCBP-209ENST00000522243 RBM20Q5T481 1227 aaKnown RBP19.72■□□□□ 0.75
SDCBP-209ENST00000522243 IGDCC3Q8IVU1 814 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 ZADH2Q8N4Q0 377 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 CISD2Q8N5K1 135 aaKnown RBP19.72■□□□□ 0.75
SDCBP-209ENST00000522243 NACC2Q96BF6 587 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 CAPZA3Q96KX2 299 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 OR2A5Q96R48 311 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 EBNA1BP2Q99848 306 aaKnown RBP19.72■□□□□ 0.75
SDCBP-209ENST00000522243 SLC17A6Q9P2U8 582 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 ADAMTS6Q9UKP5 1117 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 B3GNT3Q9Y2A9 372 aa19.72■□□□□ 0.75
SDCBP-209ENST00000522243 BLACEA4D250 179 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 H7BY64 318 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 HAT1O14929 419 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 TCP1P17987 556 aaKnown RBP19.71■□□□□ 0.75
SDCBP-209ENST00000522243 GABRB3P28472 473 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 SKIV2L2P42285 1042 aaKnown RBP19.71■□□□□ 0.75
SDCBP-209ENST00000522243 CARSP49589 748 aaKnown RBP19.71■□□□□ 0.75
SDCBP-209ENST00000522243 TIAL1Q01085 375 aaKnown RBP eCLIP19.71■□□□□ 0.75
SDCBP-209ENST00000522243 MRPL49Q13405 166 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms