RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 FPR1P21462 350 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 CMPK1P30085 196 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 WASP42768 502 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 RAPSNQ13702 412 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 KLHL22Q53GT1 634 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 UNC50Q53HI1 259 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 KANK2Q63ZY3 851 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 C14orf80Q86SX3 495 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 C1orf52Q8N6N3 182 aaKnown RBP13.46□□□□□ -0.25
SYNPO-205ENST00000522122 PYURFQ96I23 114 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 RDH12Q96NR8 316 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 PDCD10Q9BUL8 212 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 DCSTAMPQ9H295 470 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 TMED5Q9Y3A6 229 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 FABP12A6NFH5 140 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 RIIAD1A6NNX1 92 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 MANBAO00462 879 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 CLIC3O95833 236 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 NT5EP21589 574 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 GRIA2P42262 883 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 TUBB3Q13509 450 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 XKR5Q6UX68 686 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 FAM124AQ86V42 546 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 GALNT13Q8IUC8 556 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 SLC30A8Q8IWU4 369 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 TP53INP2Q8IXH6 220 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 OXR1Q8N573 874 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF433Q8N7K0 673 aaPredicted RBP13.46□□□□□ -0.25
SYNPO-205ENST00000522122 ZMIZ2Q8NF64 920 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 ISL2Q96A47 359 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 TMEM181Q9P2C4 612 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 COLEC10Q9Y6Z7 277 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 SBF2Q86WG5 1849 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 PRORSD1PA6NEY8 169 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 J3QRK9 145 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 CLDN7O95471 211 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 EBLN1P0CF75 366 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF24P17028 368 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 PTPN2P17706 415 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 STT3AP46977 705 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 DGKGP49619 791 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 GANABQ14697 944 aaKnown RBP13.46□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF311Q5JNZ3 666 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 C6orf136Q5SQH8 315 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 PSRC1Q6PGN9 363 aaPredicted RBP13.46□□□□□ -0.25
SYNPO-205ENST00000522122 SLC22A17Q8WUG5 538 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 FBXL8Q96CD0 374 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 KCNN2Q9H2S1 579 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 ANKRA2Q9H9E1 313 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 ZCCHC3Q9NUD5 404 aaKnown RBP13.46□□□□□ -0.25
SYNPO-205ENST00000522122 EEDO75530 441 aaKnown RBP13.46□□□□□ -0.26
SYNPO-205ENST00000522122 TGFB1P01137 390 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 PCCBP05166 539 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 ITPKBP27987 946 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 FAUP35544 74 aaKnown RBP13.46□□□□□ -0.26
SYNPO-205ENST00000522122 CLK3P49761 638 aaKnown RBP13.46□□□□□ -0.26
SYNPO-205ENST00000522122 ARSFP54793 590 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 SLBPQ14493 270 aaKnown RBP eCLIP13.46□□□□□ -0.26
SYNPO-205ENST00000522122 MYBPC3Q14896 1274 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 SUZ12Q15022 739 aaKnown RBP13.46□□□□□ -0.26
SYNPO-205ENST00000522122 DUOXA1Q1HG43 343 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 ALG11Q2TAA5 492 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 FAM171BQ6P995 826 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 CHST15Q7LFX5 561 aaPredicted RBP13.46□□□□□ -0.26
SYNPO-205ENST00000522122 CLIP4Q8N3C7 705 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 OR2AG1Q9H205 316 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 TBC1D17Q9HA65 648 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 YIPF1Q9Y548 306 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 ZNF831Q5JPB2 1677 aa13.46□□□□□ -0.26
SYNPO-205ENST00000522122 SAP18O00422 153 aaKnown RBP13.45□□□□□ -0.26
SYNPO-205ENST00000522122 MTX2O75431 263 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 TGFBR2P37173 567 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 GMFBP60983 142 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 GPR17Q13304 367 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 PTCHD3Q3KNS1 767 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 NANOGP8Q6NSW7 305 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 KLHL35Q6PF15 583 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 RGL4Q8IZJ4 473 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 C1orf74Q96LT6 269 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 SLC35A5Q9BS91 424 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 NANOGQ9H9S0 305 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 FAIMQ9NVQ4 179 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 SPATA7Q9P0W8 599 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 DHRS7Q9Y394 339 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 OPN1SWP03999 348 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 APODP05090 189 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 CBSLP0DN79 551 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 CBSP35520 551 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 CRISP3P54108 245 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 CREB5Q02930 508 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 SLC15A3Q8IY34 581 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 KREMEN2Q8NCW0 462 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 HDAC2Q92769 488 aaKnown RBP13.45□□□□□ -0.26
SYNPO-205ENST00000522122 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 C16orf70Q9BSU1 422 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 TAS2R7Q9NYW3 318 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 IKZF2Q9UKS7 526 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 TRBV23OR9-2A0A075B6M9 112 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms