RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 C6orf141Q5SZD1 244 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 MMAAQ8IVH4 418 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 MINDY2Q8NBR6 621 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SMG8Q8ND04 991 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TEX47Q8TBZ9 253 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 HERVK_113Q902F9 699 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 C8orf48Q96LL4 319 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC30A3Q99726 388 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 C11orf84Q9BUA3 381 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 FUNDC2Q9BWH2 189 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TTLL2Q9BWV7 592 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 PGAP2Q9UHJ9 254 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 NDRG2Q9UN36 371 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 WNT6Q9Y6F9 365 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ANKRD12Q6UB98 2062 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 MAGEB17A8MXT2 336 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 PSMD11O00231 422 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TNFRSF11BO00300 401 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 LSM1O15116 133 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TBX1O43435 398 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMCC2O75069 709 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 UGT2B17O75795 530 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 HTR1EP28566 365 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 PTPN5P54829 565 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 KCNAB2Q13303 367 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR4D1Q15615 310 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 KLHL17Q6TDP4 642 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC22A16Q86VW1 577 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TICAM1Q8IUC6 712 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 GPR65Q8IYL9 337 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZMIZ2Q8NF64 920 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 KIAA1191Q96A73 305 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMEM125Q96AQ2 219 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 PTERQ96BW5 349 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SGIP1Q9BQI5 828 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC2A11Q9BYW1 496 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 GPR62Q9BZJ7 368 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ARHGAP39Q9C0H5 1083 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 AMBNQ9NP70 447 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC22A14Q9Y267 594 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 CFAP20Q9Y6A4 193 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 EEDO75530 441 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 PAPSS2O95340 614 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 CDH12P55289 794 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 VBP1P61758 197 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 PAGE3Q5JUK9 113 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 KANK2Q63ZY3 851 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 IGFN1Q86VF2 1251 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 KBTBD8Q8NFY9 601 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZCCHC10Q8TBK6 192 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 FAM110BQ8TC76 370 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TSPEARQ8WU66 669 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 LMLNQ96KR4 655 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ART5Q96L15 291 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZNF599Q96NL3 588 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TEFMQ96QE5 360 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 KAT8Q9H7Z6 458 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 AIG1Q9NVV5 245 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 MYO7AQ13402 2215 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 HAS3O00219 553 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TAF4O00268 1085 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 XPNPEP2O43895 674 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TGFB1P01137 390 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 CYP11A1P05108 521 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SBK3P0C264 359 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 FAM163BP0C2L3 166 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 PRPS2P11908 318 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ALAS2P22557 587 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 OPRL1P41146 370 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 UPP1Q16831 310 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMEM236Q5W0B7 351 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ABHD11Q8NFV4 315 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR10Q1Q8NGQ4 319 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 TRIB2Q92519 343 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 GTPBP3Q969Y2 492 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 RELTQ969Z4 430 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 C1GALT1C1Q96EU7 318 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 NSUN3Q9H649 340 aaKnown RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SDR39U1Q9NRG7 319 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 SEMA3GQ9NS98 782 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 MAP10Q9P2G4 905 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 PCDHB3Q9Y5E6 796 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 A0A1W2PQ45 241 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 A0A1W2PQY0 241 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 WNT9AO14904 365 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 GMFGO60234 142 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 WBP4O75554 376 aaKnown RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 FABP3P05413 133 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 C8GP07360 202 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 CHRM5P08912 532 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 RAB14P61106 215 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 GPR33Q49SQ1 333 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 TNFAIP8L2Q6P589 184 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 RANBP10Q6VN20 620 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 GDPD4Q6W3E5 623 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 SYVN1Q86TM6 617 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZDHHC21Q8IVQ6 265 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 SPNS2Q8IVW8 549 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 ADGRG2Q8IZP9 1017 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 C12orf66Q96MD2 445 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms