RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 CFAP221Q4G0U5 840 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FBXO43Q4G163 708 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CDONQ4KMG0 1287 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 IQCCQ4KMZ1 466 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NKAIN1Q4KMZ8 207 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GAGE2EQ4V326 116 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ATP13A5Q4VNC0 1218 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM98BQ52LJ0 330 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 EPC2Q52LR7 807 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 IFI44LQ53G44 452 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TAF1BQ53T94 588 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM41BQ5BJD5 291 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ALG10Q5BKT4 473 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 XKR3Q5GH77 459 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FSCBQ5H9T9 825 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ALG10BQ5I7T1 473 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC73Q5JTD7 316 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPDYCQ5MJ68 293 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 C6orf10Q5SRN2 563 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCNYL2Q5T2Q4 361 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GCNT6Q5T4J0 391 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 C1orf185Q5T7R7 199 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARMC12Q5T9G4 340 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANXA8L1Q5VT79 327 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRAMEF20Q5VT98 475 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 METTL11BQ5VVY1 283 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TAF3Q5VWG9 929 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRAMEF8Q5VWM4 474 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CARD17Q5XLA6 110 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SEL1L3Q68CR1 1132 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NCR3LG1Q68D85 454 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKS6Q68DC2 871 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF772Q68DY9 489 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TXNRD3NBQ6F5E7 133 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SIGIRRQ6IA17 410 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM109BQ6ICB4 259 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 WBP2NLQ6ICG8 309 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM211Q6ICI0 200 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GRHL2Q6ISB3 625 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GAGE2AQ6NT46 116 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 METTL2BQ6P1Q9 378 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLC3Q6P597 504 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF549Q6P9A3 640 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPSB3Q6PJ21 355 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF474Q6S9Z5 364 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLEC2AQ6UVW9 174 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CD164L2Q6UWJ8 174 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ENPP7Q6UWV6 458 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM159AQ6UWV7 190 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CES3Q6UWW8 571 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 DLEU7Q6UYE1 221 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GDPD4Q6W3E5 623 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 B3GLCTQ6Y288 498 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 KYAT3Q6YP21 454 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDR88Q6ZMY6 472 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MACC1Q6ZN28 852 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM182Q6ZP80 229 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 Q6ZPA2 131 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 DCDC5Q6ZRR9 648 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 C9orf47Q6ZRZ4 202 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLEC17AQ6ZS10 378 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TPRG1Q6ZUI0 275 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PAQR9Q6ZVX9 377 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 Q6ZWC4 215 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 C1orf186Q6ZWK4 172 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MOB3CQ70IA8 216 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CREB3L2Q70SY1 520 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 BZW1Q7L1Q6 419 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LINGO2Q7L985 606 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 EFL1Q7Z2Z2 1120 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NRARPQ7Z6K4 114 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMCO2Q7Z6W1 182 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADAMTSL2Q86TH1 951 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LDB1Q86U70 411 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 BIVMQ86UB2 503 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TBC1D26Q86UD7 250 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 AACSQ86V21 672 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADIPOR2Q86V24 386 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LUZP1Q86V48 1076 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 VPS36Q86VN1 386 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 COMTD1Q86VU5 262 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKRD46Q86W74 232 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM131BQ86XD5 332 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMC8Q8IU68 726 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM126BQ8IUX1 230 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDR49Q8IV35 697 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PSTKQ8IV42 348 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC22A9Q8IVM8 553 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZDHHC21Q8IVQ6 265 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MISPQ8IVT2 679 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERPINA12Q8IW75 414 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC60Q8IWA6 550 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LAX1Q8IWV1 398 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 DHX40Q8IX18 779 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PHC2Q8IXK0 858 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLHDC8AQ8IYD2 350 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZDHHC23Q8IYP9 409 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 DCP1BQ8IZD4 617 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADGRF3Q8IZF5 1079 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MYOCDQ8IZQ8 938 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms