RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 JTBO76095 146 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 RECQL5O94762 991 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ADCY5O95622 1261 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 FTLP02792 175 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 AMY1AP04745 511 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 MYL1P05976 194 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 KLK3P07288 261 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 IVLP07476 585 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 HNRNPCP07910 306 aaKnown RBP eCLIP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 PLEKP08567 350 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 CD63P08962 238 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 RAB40ALP0C0E4 278 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 TRIM49P0CI25 452 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 TRIM49CP0CI26 452 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC2A4P14672 509 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ACANP16112 2415 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 NR2F2P24468 414 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 HADHAP40939 763 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 TSFMP43897 325 aaKnown RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ARCN1P48444 511 aaKnown RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 CXCR3P49682 368 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 NUMBP49757 651 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 MXI1P50539 228 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ART1P52961 327 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 DSC2Q02487 901 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 MN1Q10571 1320 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 STK4Q13043 487 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 CEP78Q5JTW2 689 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ANKRD40Q6AI12 368 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 RPUSD3Q6P087 351 aaKnown RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 TMEM270Q6UE05 265 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 BIVMQ86UB2 503 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC9B2Q86UD5 537 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 GRAMD1CQ8IYS0 662 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF683Q8IZ20 524 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 DEFB106AQ8N104 65 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 PDILTQ8N807 584 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 TOR1AIP2Q8NFQ8 470 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 CT55Q8WUE5 264 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ITLN2Q8WWU7 325 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 SEMA4DQ92854 862 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 PGAP3Q96FM1 320 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 C9orf72Q96LT7 481 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 GDAP1L1Q96MZ0 367 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 LRFN5Q96NI6 719 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 OR6C1Q96RD1 312 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 FOXC2Q99958 501 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ZYG11BQ9C0D3 744 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 RAB33BQ9H082 229 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 MAGEH1Q9H213 219 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 CXXC4Q9H2H0 198 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 FAM204AQ9H8W3 233 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 UCK1Q9HA47 277 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 PHPT1Q9NRX4 125 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 DDIT4Q9NX09 232 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ARHGEF38Q9NXL2 777 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 SEMA5BQ9P283 1151 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF212Q9UDV6 495 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 FEZ2Q9UHY8 353 aaPredicted RBP3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 MOSPD1Q9UJG1 213 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC17A4Q9Y2C5 497 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 CLIC4Q9Y696 253 aa3.57□□□□□ -1.84
PDLIM5-218ENST00000513341 ANKRD36A6QL64 1941 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 KIR2DS5A0A0G2JLQ3 304 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 A0A0G2JNG1 304 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 A0A0U1RQS6 177 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 A0A1W2PQ67 120 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 LILRA5A6NI73 299 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 FAM227AF5H4B4 570 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 KIR2DS3K7RE56 304 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 M0QYV0 167 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 MED7O43513 233 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 IGSF6O95976 241 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 PCCBP05166 539 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 PYGLP06737 847 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 CHRM2P08172 466 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 NELFEP18615 380 aaKnown RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 XRCC1P18887 633 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 KLK2P20151 261 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 AK4P27144 223 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 GKP32189 559 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 MMP12P39900 470 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ACTR1BP42025 376 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 CSNK1DP48730 415 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 PPM1FP49593 454 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 THBS3P49746 956 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 SMSP52788 366 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 GSDMDP57764 484 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ACTR1AP61163 376 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 ACY1Q03154 408 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 TLE4Q04727 773 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 CHAF1BQ13112 559 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 DYRK1AQ13627 763 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 GBX1Q14549 363 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 HLXQ14774 488 aaPredicted RBP3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 KIR2DS5Q14953 304 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 KCTD16Q68DU8 428 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 IYDQ6PHW0 289 aa3.56□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC30A9Q6PML9 568 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms