RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CENPQQ7L2Z9 268 aaPredicted RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 C16orf82Q7Z2V1 217 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CCDC186Q7Z3E2 898 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 SLC9B2Q86UD5 537 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 TICAM2Q86XR7 235 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 TMEM219Q86XT9 240 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CFAP206Q8IYR0 622 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 RBM15BQ8NDT2 890 aaKnown RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 SMPDL3BQ92485 455 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 MRPS27Q92552 414 aaKnown RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 NXNL1Q96CM4 212 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 PGAP3Q96FM1 320 aaPredicted RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 RAB3IPQ96QF0 476 aaPredicted RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 IL25Q9H293 177 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 EVA1AQ9H8M9 152 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 SLC38A10Q9HBR0 1119 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 OLFML3Q9NRN5 406 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CPSF3Q9UKF6 684 aaKnown RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 ZNF711Q9Y462 761 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 SPIN1Q9Y657 262 aaPredicted RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 DDX49Q9Y6V7 483 aaKnown RBP4.01□□□□□ -1.77
HTT-210ENST00000512909 NEDD4P46934 1319 aa4□□□□□ -1.77
HTT-210ENST00000512909 ZCWPW2A0A1B0GU75 182 aa4□□□□□ -1.77
HTT-210ENST00000512909 A0A1W2PR77 199 aa4□□□□□ -1.77
HTT-210ENST00000512909 A0A1W2PS18 150 aa4□□□□□ -1.77
HTT-210ENST00000512909 OR2M5A3KFT3 312 aa4□□□□□ -1.77
HTT-210ENST00000512909 IKBKBO14920 756 aa4□□□□□ -1.77
HTT-210ENST00000512909 SNAI1O95863 264 aaPredicted RBP4□□□□□ -1.77
HTT-210ENST00000512909 LINGO3P0C6S8 592 aa4□□□□□ -1.77
HTT-210ENST00000512909 PCP11498 1178 aaKnown RBP4□□□□□ -1.77
HTT-210ENST00000512909 CSF2RAP15509 400 aa4□□□□□ -1.77
HTT-210ENST00000512909 CDH13P55290 713 aa4□□□□□ -1.77
HTT-210ENST00000512909 NANOS2P60321 138 aaKnown RBP4□□□□□ -1.77
HTT-210ENST00000512909 PITX1P78337 314 aaPredicted RBP4□□□□□ -1.77
HTT-210ENST00000512909 CAMK2DQ13557 499 aa4□□□□□ -1.77
HTT-210ENST00000512909 FIGLAQ6QHK4 219 aa4□□□□□ -1.77
HTT-210ENST00000512909 GFRALQ6UXV0 394 aa4□□□□□ -1.77
HTT-210ENST00000512909 ARMCX2Q7L311 632 aa4□□□□□ -1.77
HTT-210ENST00000512909 ADCK2Q7Z695 626 aa4□□□□□ -1.77
HTT-210ENST00000512909 COMMD2Q86X83 199 aa4□□□□□ -1.77
HTT-210ENST00000512909 CEP57Q86XR8 500 aa4□□□□□ -1.77
HTT-210ENST00000512909 PTOV1Q86YD1 416 aa4□□□□□ -1.77
HTT-210ENST00000512909 ZNF441Q8N8Z8 693 aa4□□□□□ -1.77
HTT-210ENST00000512909 CTCFLQ8NI51 663 aaPredicted RBP4□□□□□ -1.77
HTT-210ENST00000512909 ATL1Q8WXF7 558 aa4□□□□□ -1.77
HTT-210ENST00000512909 VPS33AQ96AX1 596 aa4□□□□□ -1.77
HTT-210ENST00000512909 STAMBPL1Q96FJ0 436 aa4□□□□□ -1.77
HTT-210ENST00000512909 CAMK1GQ96NX5 476 aa4□□□□□ -1.77
HTT-210ENST00000512909 TAAR1Q96RJ0 339 aa4□□□□□ -1.77
HTT-210ENST00000512909 GFI1Q99684 422 aa4□□□□□ -1.77
HTT-210ENST00000512909 TRAF4Q9BUZ4 470 aaPredicted RBP4□□□□□ -1.77
HTT-210ENST00000512909 LRRC2Q9BYS8 371 aa4□□□□□ -1.77
HTT-210ENST00000512909 WNT5BQ9H1J7 359 aa4□□□□□ -1.77
HTT-210ENST00000512909 ERVMER34-1Q9H9K5 563 aa4□□□□□ -1.77
HTT-210ENST00000512909 TBC1D17Q9HA65 648 aa4□□□□□ -1.77
HTT-210ENST00000512909 LRRC4Q9HBW1 653 aa4□□□□□ -1.77
HTT-210ENST00000512909 HAO2Q9NYQ3 351 aa4□□□□□ -1.77
HTT-210ENST00000512909 WSB2Q9NYS7 404 aaPredicted RBP4□□□□□ -1.77
HTT-210ENST00000512909 GDE1Q9NZC3 331 aa4□□□□□ -1.77
HTT-210ENST00000512909 PTTG2Q9NZH5 202 aa4□□□□□ -1.77
HTT-210ENST00000512909 KLHL9Q9P2J3 617 aa4□□□□□ -1.77
HTT-210ENST00000512909 ANAPC2Q9UJX6 822 aa4□□□□□ -1.77
HTT-210ENST00000512909 DLGAP4Q9Y2H0 992 aa4□□□□□ -1.77
HTT-210ENST00000512909 MRPL11Q9Y3B7 192 aaKnown RBP4□□□□□ -1.77
HTT-210ENST00000512909 PFASO15067 1338 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 CEP350Q5VT06 3117 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 PRSS51A0A1B0GVH4 220 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 ARHGEF37A1IGU5 675 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 DNM1LO00429 736 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 SYNGR3O43761 229 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 ZNF500O60304 480 aaPredicted RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 MED24O75448 989 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 PSMD10O75832 226 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 ASGR1P07306 291 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 PDHBP11177 359 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 CYBAP13498 195 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 FDPSP14324 419 aaKnown RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 CBLP22681 906 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 EPHA2P29317 976 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 KIF5BP33176 963 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 PDX1P52945 283 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 ACLYP53396 1101 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 RPL36AP83881 106 aaKnown RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 EEF1A2Q05639 463 aaKnown RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 SPOCK1Q08629 439 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 GAGE5Q13069 117 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 GAGE6Q13070 117 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 IL11RAQ14626 422 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 CDC37Q16543 378 aaPredicted RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 KYNUQ16719 465 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 QRICH1Q2TAL8 776 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 C9orf57Q5W0N0 161 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 PRSS57Q6UWY2 283 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 RAD9BQ6WBX8 426 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 CENPVQ7Z7K6 275 aaPredicted RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 FBXO16Q8IX29 292 aaPredicted RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 GPALPP1Q8IXQ4 340 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 NAGSQ8N159 534 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 ZBTB8BQ8NAP8 495 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms