RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ABATP80404 500 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 Q0VFX4 171 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 DSG2Q14126 1118 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 ANKRD20A4Q4UJ75 823 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 SP5Q6BEB4 398 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-216ENST00000512683 C2orf73Q8N5S3 287 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-216ENST00000512683 OR1N1Q8NGS0 311 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 OR9A1PQ8NGU1 263 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-216ENST00000512683 MAIP1Q8WWC4 291 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 SMPDL3AQ92484 453 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 CNDP1Q96KN2 507 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 MIPEPQ99797 713 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 MKKSQ9NPJ1 570 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-216ENST00000512683 FAM114A2Q9NRY5 505 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 VPS9D1Q9Y2B5 631 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 CSAG2Q9Y5P2 127 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 KLF2Q9Y5W3 355 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-216ENST00000512683 PCSK5Q92824 1860 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 LOC102723996A0A087X1L8 192 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 A0A0J9YVX5 310 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 A0A1W2PPV9 198 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 MASP2O00187 686 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 WFS1O76024 890 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 KLHL18O94889 574 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 CCNDBP1O95273 360 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 CRYABP02511 175 aaKnown RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 PRR35P0CG20 571 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 FBLP22087 321 aaKnown RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 ELAVL4P26378 380 aaKnown RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 ARNTP27540 789 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 TNFRSF8P28908 595 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 TNFSF10P50591 281 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 FOXL2P58012 376 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 BASP1P80723 227 aaKnown RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 PRDX1Q06830 199 aaKnown RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 FAM53BQ14153 422 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 GBX1Q14549 363 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 TTC27Q6P3X3 843 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 GSTA5Q7RTV2 222 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 KRT222Q8N1A0 295 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 FBXO15Q8NCQ5 510 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 SKA2Q8WVK7 121 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 PSMF1Q92530 271 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 NR4A3Q92570 626 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 EBNA1BP2Q99848 306 aaKnown RBP11.97□□□□□ -0.49
VEGFA-216ENST00000512683 PLCD4Q9BRC7 762 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 KIFC1Q9BW19 673 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 ZNF160Q9HCG1 818 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 RIC8BQ9NVN3 520 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 ABI3Q9P2A4 366 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 TEKT2Q9UIF3 430 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 CNTRLQ7Z7A1 2325 aa11.97□□□□□ -0.49
VEGFA-216ENST00000512683 LOC105369274A0A096LPK9 316 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 LOC102723532A0A0G2JNH3 316 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 MAGEB16A2A368 324 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 IDSB3KWA1 339 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 H0YGG7 62 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 TPSB2P20231 275 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 HRH2P25021 359 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 MGAT1P26572 445 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 SLC26A3P40879 764 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 MAGEA6P43360 314 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 ARF3P61204 181 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-216ENST00000512683 KCNJ11Q14654 390 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 TPSAB1Q15661 275 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 NDUFA9Q16795 377 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 FRMPD2BQ6IN97 320 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 LRRC8BQ6P9F7 803 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 TMEM205Q6UW68 189 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 LINC00696Q6ZRV3 163 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 SHISA6Q6ZSJ9 500 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 NEK10Q6ZWH5 1172 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 TMEM151BQ8IW70 566 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 OR4N4Q8N0Y3 316 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 RASGEF1CQ8N431 466 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 CATSPER1Q8NEC5 780 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 SUN3Q8TAQ9 357 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 MARVELD3Q96A59 401 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 MFSD3Q96ES6 412 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 CABS1Q96KC9 395 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 BIRC8Q96P09 236 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 DPH7Q9BTV6 452 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 MRPS30Q9NP92 439 aaKnown RBP11.96□□□□□ -0.49
VEGFA-216ENST00000512683 CHST11Q9NPF2 352 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 HOMER3Q9NSC5 361 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 SYBUQ9NX95 663 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 COPG2Q9UBF2 871 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 SUCOQ9UBS9 1254 aaKnown RBP11.96□□□□□ -0.49
VEGFA-216ENST00000512683 PCDHGB6Q9Y5F9 930 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 MAU2Q9Y6X3 613 aa11.96□□□□□ -0.49
VEGFA-216ENST00000512683 NUP210LQ5VU65 1888 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 HEATR5BQ9P2D3 2071 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 IGHV1-45A0A0A0MS14 117 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 MYO1CO00159 1063 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 AVILO75366 819 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 PSIP1O75475 530 aaKnown RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 CATP04040 527 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms