RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 H2AFZP0C0S5 128 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 FAM228BP0C875 321 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 DNASE1P24855 282 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 SLC26A3P40879 764 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 ZNF140P52738 457 aaPredicted RBP10.96□□□□□ -0.65
RNF4-216ENST00000511859 DYNLT1P63172 113 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 MSLNQ13421 630 aaPredicted RBP10.96□□□□□ -0.65
RNF4-216ENST00000511859 OR1C1Q15619 314 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 ODF2Q5BJF6 829 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 PLAG1Q6DJT9 500 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 SPINK14Q6IE38 97 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 NAPRTQ6XQN6 538 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 CEP128Q6ZU80 1094 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 H2AFVQ71UI9 128 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 TAS2R42Q7RTR8 314 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 CNGA4Q8IV77 575 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 BEST3Q8N1M1 668 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 LMNTD1Q8N9Z9 388 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 OR2L8Q8NGY9 312 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 FAM57AQ8TBR7 257 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 ANP32BQ92688 251 aaKnown RBP10.96□□□□□ -0.65
RNF4-216ENST00000511859 RND1Q92730 232 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 SYN2Q92777 582 aaPredicted RBP10.96□□□□□ -0.65
RNF4-216ENST00000511859 CHP1Q99653 195 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 MENTQ9BUN1 341 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 UCK2Q9BZX2 261 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 ZNHIT6Q9NWK9 470 aaKnown RBP10.96□□□□□ -0.65
RNF4-216ENST00000511859 SAE1Q9UBE0 346 aaPredicted RBP10.96□□□□□ -0.65
RNF4-216ENST00000511859 RSPH14Q9UHP6 348 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 RNF6Q9Y252 685 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 STAB1Q9NY15 2570 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 ATRQ13535 2644 aa10.96□□□□□ -0.66
RNF4-216ENST00000511859 NKX2-6A6NCS4 301 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 GOLGA6L6A8MZA4 724 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 ZNHIT1O43257 154 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 CTAG2O75638 210 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 SERPING1P05155 500 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 EIF2S1P05198 315 aaKnown RBP10.95□□□□□ -0.66
RNF4-216ENST00000511859 SP1P08047 785 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 C8orf89P0DMQ9 161 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 ERVK-10P10266 1014 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 ADRA1AP35348 466 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 PTGS2P35354 604 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 HSF1Q00613 529 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 SYTL3Q4VX76 610 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 FRMPD2BQ6IN97 320 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 SLC25A25Q6KCM7 469 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 GALNTL5Q7Z4T8 443 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 CAMKMTQ7Z624 323 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.95□□□□□ -0.66
RNF4-216ENST00000511859 C2orf73Q8N5S3 287 aaPredicted RBP10.95□□□□□ -0.66
RNF4-216ENST00000511859 MYRIPQ8NFW9 859 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 METTL21AQ8WXB1 218 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 POLDIP3Q9BY77 421 aaKnown RBP10.95□□□□□ -0.66
RNF4-216ENST00000511859 HES7Q9BYE0 225 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 SMARCAL1Q9NZC9 954 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 SLC39A10Q9ULF5 831 aa10.95□□□□□ -0.66
RNF4-216ENST00000511859 AAR2Q9Y312 384 aaKnown RBP10.95□□□□□ -0.66
RNF4-216ENST00000511859 TLN2Q9Y4G6 2542 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 LOC105369274A0A096LPK9 316 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 LOC102723532A0A0G2JNH3 316 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 A0A0J9YVX5 310 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 FAM90A27PA6NNH2 459 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 F8W8V4 182 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 PROM1O43490 865 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 KLK8O60259 260 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 CYC1P08574 325 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 OR56A5P0C7T3 313 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 ZNF24P17028 368 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 MEOX1P50221 254 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 TFDP2Q14188 446 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 ITIH4Q14624 930 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 MESDQ14696 234 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 BTBD16Q32M84 506 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 LRRC38Q5VT99 294 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 FGD2Q7Z6J4 655 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 DCUN1D3Q8IWE4 304 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 OR4N4Q8N0Y3 316 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 P3H4Q92791 437 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
RNF4-216ENST00000511859 MBD6Q96DN6 1003 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 CABS1Q96KC9 395 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 C10orf90Q96M02 699 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 OLFM1Q99784 485 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 RAB11FIP5Q9BXF6 653 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 KCNK13Q9HB14 408 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 ZNF358Q9NW07 568 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 ANKRD10Q9NXR5 420 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 DDX56Q9NY93 547 aaKnown RBP10.94□□□□□ -0.66
RNF4-216ENST00000511859 STOX2Q9P2F5 926 aaPredicted RBP10.94□□□□□ -0.66
RNF4-216ENST00000511859 IMPACTQ9P2X3 320 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 FEZ2Q9UHY8 353 aaPredicted RBP10.94□□□□□ -0.66
RNF4-216ENST00000511859 PRSS21Q9Y6M0 314 aa10.94□□□□□ -0.66
RNF4-216ENST00000511859 FAM237BA0A1B0GVD1 139 aa10.93□□□□□ -0.66
RNF4-216ENST00000511859 USP27XA6NNY8 438 aa10.93□□□□□ -0.66
RNF4-216ENST00000511859 FAM171A2A8MVW0 826 aa10.93□□□□□ -0.66
RNF4-216ENST00000511859 CST8O60676 142 aa10.93□□□□□ -0.66
RNF4-216ENST00000511859 TPOP07202 933 aa10.93□□□□□ -0.66
RNF4-216ENST00000511859 ANXA5P08758 320 aa10.93□□□□□ -0.66
RNF4-216ENST00000511859 DGKQP52824 942 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms