RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SLC1A5Q15758 541 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 PTGISQ16647 500 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 ZNF674Q2M3X9 581 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 LRRC73Q5JTD7 316 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 CYP4A22Q5TCH4 519 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 ARHGAP17Q68EM7 881 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 TXNRD3NBQ6F5E7 133 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CHD1-207ENST00000511628 PRSS55Q6UWB4 352 aaPredicted RBP2.87□□□□□ -1.95
CHD1-207ENST00000511628 BTNL8Q6UX41 500 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 GBP6Q6ZN66 633 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD33Q7Z3H0 272 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 NRARPQ7Z6K4 114 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 NUDT13Q86X67 352 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 ZNF383Q8NA42 475 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 PPFIBP2Q8ND30 876 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 KBTBD8Q8NFY9 601 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 OR4K1Q8NGD4 311 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 RIT1Q92963 219 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 PTP4A1Q93096 173 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 BSCL2Q96G97 398 aaPredicted RBP2.87□□□□□ -1.95
CHD1-207ENST00000511628 PARK7Q99497 189 aaKnown RBP2.87□□□□□ -1.95
CHD1-207ENST00000511628 GFRA4Q9GZZ7 299 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 SHARPINQ9H0F6 387 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 TLE6Q9H808 572 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 CWC25Q9NXE8 425 aaPredicted RBP2.87□□□□□ -1.95
CHD1-207ENST00000511628 SEPT10Q9P0V9 454 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.87□□□□□ -1.95
CHD1-207ENST00000511628 ZDHHC2Q9UIJ5 367 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 ACAD8Q9UKU7 415 aa2.87□□□□□ -1.95
CHD1-207ENST00000511628 MRPS28Q9Y2Q9 187 aaKnown RBP2.87□□□□□ -1.95
CHD1-207ENST00000511628 IGLV9-49A0A0B4J1Y8 123 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 LOC101059948A0A1B0GTJ6 334 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 A0A1W2PPW3 197 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 SLC30A4O14863 429 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 FMO6PO60774 539 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 BAG3O95817 575 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 HSP90AB1P08238 724 aaKnown RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 HMBSP08397 361 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 VIMP08670 466 aaKnown RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD34CP0C6C1 535 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 SPP1P10451 314 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 IRF2P14316 349 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ALDH1B1P30837 517 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ADARP55265 1226 aaKnown RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 SQLEQ14534 574 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 NONOQ15233 471 aaKnown RBP eCLIP2.86□□□□□ -1.95
CHD1-207ENST00000511628 ODF4Q2M2E3 257 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ZFP69Q49AA0 526 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD20A4Q4UJ75 823 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ZC2HC1CQ53FD0 456 aaPredicted RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD20A8PQ5CZ79 823 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 SLC25A53Q5H9E4 307 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD20A2Q5SQ80 823 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD20A1Q5TYW2 823 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD20A3Q5VUR7 823 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ARHGEF16Q5VV41 709 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 FAM166AQ6J272 317 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 MSANTD1Q6ZTZ1 278 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 HOOK3Q86VS8 718 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 KLHL7Q8IXQ5 586 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 TIGD4Q8IY51 512 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 CDK20Q8IZL9 346 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 SYCP3Q8IZU3 236 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 LGI2Q8N0V4 545 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 EID3Q8N140 333 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 NUP93Q8N1F7 819 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 KLHDC1Q8N7A1 406 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 RASGEF1AQ8N9B8 481 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 NAT8LQ8N9F0 302 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 ATAD1Q8NBU5 361 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 DNASE1L2Q92874 299 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 NSL1Q96IY1 281 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ART5Q96L15 291 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 FUT8Q9BYC5 575 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 RSPH9Q9H1X1 276 aaPredicted RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 MMADHCQ9H3L0 296 aaPredicted RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 ARGLU1Q9NWB6 273 aaPredicted RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 ERAP1Q9NZ08 941 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 ARMCX3Q9UH62 379 aaPredicted RBP2.86□□□□□ -1.95
CHD1-207ENST00000511628 STUB1Q9UNE7 303 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 KCNJ14Q9UNX9 436 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 TRIM17Q9Y577 477 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 STK36Q9NRP7 1315 aa2.86□□□□□ -1.95
CHD1-207ENST00000511628 TRAV24A0A0B4J272 114 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD61A6NGH8 418 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 PRSS46E5RG02 174 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 PSMA7O14818 248 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 IFIT3O14879 490 aaKnown RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 ARPC2O15144 300 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 PRKRAO75569 313 aaKnown RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 GOSR1O95249 250 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 PGLSO95336 258 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 PIGNO95427 931 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 NGFP01138 241 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 RLN1P04808 185 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 SERPING1P05155 500 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 IGHV4-38-2P0DP08 117 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 ERVK-10P10266 1014 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms