RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 GPAMQ9HCL2 828 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 SLC22A11Q9NSA0 550 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 WDR70Q9NW82 654 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 TXNDC16Q9P2K2 825 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 MTRF1LQ9UGC7 380 aaKnown RBP11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 SNX7Q9UNH6 387 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 FARSAQ9Y285 508 aaKnown RBP11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 A0A0J9YVX5 310 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 H0YGG7 62 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 TK2O00142 265 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 CREG1O75629 220 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 KLF7O75840 302 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 CCNDBP1O95273 360 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 MED26O95402 600 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 FURINP09958 794 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 HIST1H2AGP0C0S8 130 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 HIST1H2ADP20671 130 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 HRH2P25021 359 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 EMP3P54852 163 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 RAB10P61026 200 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 ARF3P61204 181 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 TBPL1P62380 186 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 CDKL1Q00532 357 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 MC1RQ01726 317 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 CDC20Q12834 499 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 WASHC2DQ5SRD0 308 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 YOD1Q5VVQ6 348 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 LCTLQ6UWM7 567 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 SPATA6LQ8N4H0 392 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 EXD3Q8N9H8 876 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 ABHD11Q8NFV4 315 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 N4BP2L2Q92802 583 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 TSPAN17Q96FV3 270 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 HIST1H2AHQ96KK5 128 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 CYTH2Q99418 400 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 HIST1H2AJQ99878 128 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 SELENOSQ9BQE4 189 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 H2AFJQ9BTM1 129 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 TRIM54Q9BYV2 358 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 CDC42EP4Q9H3Q1 356 aaKnown RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 ACTL8Q9H568 366 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 CCDC177Q9NQR7 707 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 TMEM184CQ9NVA4 438 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 CUEDC1Q9NWM3 386 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 ARL15Q9NXU5 204 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 DHCR7Q9UBM7 475 aaKnown RBP11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 SRPK3Q9UPE1 567 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 SH2B3Q9UQQ2 575 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 OARD1Q9Y530 152 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 IGSF10Q6WRI0 2623 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 ATMQ13315 3056 aa11.24□□□□□ -0.61
HMGXB3-203ENST00000510472 KCNE1BA0A087WTH5 132 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 NPEPPSL1A6NEC2 478 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 H7BY64 318 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 PHGDHO43175 533 aaKnown RBP11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 KATNA1O75449 491 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 CCDC166P0CW27 439 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 EZRP15311 586 aaKnown RBP11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 CD1DP15813 335 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 STMN1P16949 149 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 CCND1P24385 295 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 SLC26A3P40879 764 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 KCNC1P48547 511 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 ARSFP54793 590 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 SLC12A2P55011 1212 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 VSX2P58304 361 aaPredicted RBP11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 CSNK1G2P78368 415 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 DCDP81605 110 aaKnown RBP11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 NFKB2Q00653 900 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 GRM7Q14831 915 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 TSNQ15631 228 aaKnown RBP11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 NKAIN1Q4KMZ8 207 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 CDKL4Q5MAI5 379 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 ATP1A1-AS1Q5TC04 95 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 PRAMEF13Q5VWM6 474 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 MRPL14Q6P1L8 145 aaKnown RBP11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 SYVN1Q86TM6 617 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 IFT20Q8IY31 132 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 KLHDC8AQ8IYD2 350 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 OR4K1Q8NGD4 311 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 ADAMTS17Q8TE56 1095 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 ATL1Q8WXF7 558 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 EXTL1Q92935 676 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 PRAP1Q96NZ9 151 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 CATSPER2Q96P56 530 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 NDC1Q9BTX1 674 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 SARGQ9BW04 601 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 TXLNGYQ9BZA5 131 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 STARD5Q9NSY2 213 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 CUTCQ9NTM9 273 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 CTNNAL1Q9UBT7 734 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 TCFL5Q9UL49 500 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 NFU1Q9UMS0 254 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 ATRXP46100 2492 aa11.23□□□□□ -0.61
HMGXB3-203ENST00000510472 HYKKA2RU49 373 aa11.22□□□□□ -0.61
HMGXB3-203ENST00000510472 HAT1O14929 419 aa11.22□□□□□ -0.61
HMGXB3-203ENST00000510472 DSCR3O14972 297 aa11.22□□□□□ -0.61
HMGXB3-203ENST00000510472 CNOT3O75175 753 aaKnown RBP11.22□□□□□ -0.61
HMGXB3-203ENST00000510472 SNRNP200O75643 2136 aaKnown RBP11.22□□□□□ -0.61
HMGXB3-203ENST00000510472 GUCA1CO95843 209 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms