RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 TNFSF14O43557 240 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 KDELR3O43731 214 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 SKAP2O75563 359 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 CALB1P05937 261 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 MYBL1P10243 752 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 KELP23276 732 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 MAT2AP31153 395 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 GRK6P43250 576 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 RXRGP48443 463 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 HCAR3P49019 387 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ARRB1P49407 418 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 AGTR2P50052 363 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 DNA2P51530 1060 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 CCNHP51946 323 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 AIF1P55008 147 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 RPL7AP62424 266 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 OGDHQ02218 1023 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 SLC20A2Q08357 652 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 OVGP1Q12889 678 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 BIRC2Q13490 618 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 SLC18A3Q16572 532 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ZNF284Q2VY69 593 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 BTBD16Q32M84 506 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 SETMARQ53H47 684 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 CARD16Q5EG05 197 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 C10orf62Q5T681 223 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ZNF626Q68DY1 528 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 RWDD4Q6NW29 188 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 NEK5Q6P3R8 708 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ACSM6Q6P461 480 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 C22orf39Q6P5X5 142 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ALKBH5Q6P6C2 394 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 KYAT3Q6YP21 454 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 CCNI2Q6ZMN8 369 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ZNF813Q6ZN06 617 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ERN2Q76MJ5 926 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 SLFN11Q7Z7L1 901 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 IQCHQ86VS3 1027 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 HORMAD1Q86X24 394 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 DNAAF5Q86Y56 855 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 GATAD2AQ86YP4 633 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 MYLK4Q86YV6 388 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 PSTKQ8IV42 348 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 PYROXD2Q8N2H3 581 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 GALNT16Q8N428 558 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 PCDH20Q8N6Y1 951 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 RTL3Q8N8U3 475 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 OR52L2PQ8NGH6 319 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 OR1N1Q8NGS0 311 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 AKAP1Q92667 903 aaKnown RBP eCLIP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ARHGEF2Q92974 986 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 NTAN1Q96AB6 310 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ISG20Q96AZ6 181 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 TBC1D31Q96DN5 1066 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 PPP1R16AQ96I34 528 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 CCDC114Q96M63 670 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 PANX2Q96RD6 677 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 CNPY3Q9BT09 278 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 MAGEH1Q9H213 219 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 NHEJ1Q9H9Q4 299 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 MRPL47Q9HD33 250 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 NRIP3Q9NQ35 241 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 DYRK4Q9NR20 520 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 GDF3Q9NR23 364 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 SEPT11Q9NVA2 429 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 TMEM248Q9NWD8 314 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 ZNHIT6Q9NWK9 470 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 GAR1Q9NY12 217 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 FZD10Q9ULW2 581 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 CA5BQ9Y2D0 317 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 CNOT1A5YKK6 2376 aaKnown RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 SPEGQ15772 3267 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 SHROOM3Q8TF72 1996 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 NCOR2Q9Y618 2525 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 DNAJC9-AS1A6NH13 148 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 SRRM3A6NNA2 597 aaPredicted RBP3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 TMCO5BA8MYB1 307 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 PRYO14603 147 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 RRHO14718 337 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 RAD51BO15315 384 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 TP73O15350 636 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 SLC31A1O15431 190 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 CREB3O43889 395 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 MAGEC1O60732 1142 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 MTA2O94776 668 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 POP4O95707 220 aaKnown RBP3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 LDOC1O95751 146 aaPredicted RBP3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 GSRP00390 522 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 H2AFZP0C0S5 128 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 THEGLP0DJG4 465 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 ADRB3P13945 408 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 PRLRP16471 622 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 HNRNPA2B1P22626 353 aaKnown RBP3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 IL4RP24394 825 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 NDUFS1P28331 727 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 DUSP1P28562 367 aa3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 EPHA8P29322 1005 aaPredicted RBP3.48□□□□□ -1.85
UBE2D3-226ENST00000508635 TACR3P29371 465 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms