RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 NECAB2Q7Z6G3 386 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 GLB1L3Q8NCI6 653 aaPredicted RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 DDHD1Q8NEL9 900 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 SLC47A1Q96FL8 570 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 RAD9AQ99638 391 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 DPH2Q9BQC3 489 aaPredicted RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 REXO4Q9GZR2 422 aaKnown RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 STOX2Q9P2F5 926 aaPredicted RBP14.05□□□□□ -0.16
DDX41-208ENST00000507955 TBC1D14Q9P2M4 693 aa14.05□□□□□ -0.16
DDX41-208ENST00000507955 MAGEB17A8MXT2 336 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 SPINT1O43278 529 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 CPSF4O95639 269 aaKnown RBP14.04□□□□□ -0.16
DDX41-208ENST00000507955 MPC1LP0DKB6 136 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 MMP12P39900 470 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 ARSFP54793 590 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 MEF2AQ02078 507 aaPredicted RBP14.04□□□□□ -0.16
DDX41-208ENST00000507955 TMEM240Q5SV17 173 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 XKR5Q6UX68 686 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 TRAM1L1Q8N609 369 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 OSCP1Q8WVF1 389 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 ZNF707Q96C28 371 aaPredicted RBP14.04□□□□□ -0.16
DDX41-208ENST00000507955 FAM120BQ96EK7 910 aaKnown RBP14.04□□□□□ -0.16
DDX41-208ENST00000507955 PKP4Q99569 1192 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 IFT80Q9P2H3 777 aaPredicted RBP14.04□□□□□ -0.16
DDX41-208ENST00000507955 PCYT1BQ9Y5K3 369 aaPredicted RBP14.04□□□□□ -0.16
DDX41-208ENST00000507955 TRIOO75962 3097 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 GRXCR2A6NFK2 248 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 SAP18O00422 153 aaKnown RBP14.04□□□□□ -0.16
DDX41-208ENST00000507955 RFXANKO14593 260 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 CREG1O75629 220 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 DIRAS1O95057 198 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 MATN1P21941 496 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 SPIDRQ14159 915 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 UGT8Q16880 541 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 ZDHHC20Q5W0Z9 365 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 KIAA0907Q7Z7F0 614 aaPredicted RBP14.04□□□□□ -0.16
DDX41-208ENST00000507955 ADGRD2Q7Z7M1 963 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 SYT12Q8IV01 421 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 CFAP206Q8IYR0 622 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 TBC1D15Q8TC07 691 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 ITCHQ96J02 903 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 ZSCAN5AQ9BUG6 496 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 OR2AG1Q9H205 316 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 PLGRKTQ9HBL7 147 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 EXD2Q9NVH0 621 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 TMEM45AQ9NWC5 275 aa14.04□□□□□ -0.16
DDX41-208ENST00000507955 ATG2BQ96BY7 2078 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 SH3PXD2BA1X283 911 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 LINC01553A4QN01 128 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 MMP20O60882 483 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 ADH5P11766 374 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 JUPP14923 745 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 IMPA1P29218 277 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 CATSPEREQ5SY80 951 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 IER5LQ5T953 404 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 FAM109BQ6ICB4 259 aaPredicted RBP14.03□□□□□ -0.16
DDX41-208ENST00000507955 CES5AQ6NT32 575 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 SPESP1Q6UW49 350 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 MICU2Q8IYU8 434 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 CMTM7Q96FZ5 175 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 CPPED1Q9BRF8 314 aaPredicted RBP14.03□□□□□ -0.16
DDX41-208ENST00000507955 GORASP2Q9H8Y8 452 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 KLHL42Q9P2K6 505 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 GNGT2O14610 69 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 NPC1O15118 1278 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 DEAF1O75398 565 aaPredicted RBP14.03□□□□□ -0.16
DDX41-208ENST00000507955 SOD1P00441 154 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 FTH1P02794 183 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 ALPLP05186 524 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 GSTM1P09488 218 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 LAMP1P11279 417 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 PIGAP37287 484 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 HLCSP50747 726 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 GZMMP51124 257 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 GSTM4Q03013 218 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 ZNF621Q6ZSS3 439 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 NEIL2Q969S2 332 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 PANX1Q96RD7 426 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 BARD1Q99728 777 aaKnown RBP14.03□□□□□ -0.16
DDX41-208ENST00000507955 KCNH6Q9H252 994 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 SGK2Q9HBY8 427 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 THG1LQ9NWX6 298 aaKnown RBP14.03□□□□□ -0.16
DDX41-208ENST00000507955 ASIC5Q9NY37 505 aa14.03□□□□□ -0.16
DDX41-208ENST00000507955 TRIM64BA6NI03 449 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 G3V2T6 193 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 ATG13O75143 517 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 PSIP1O75475 530 aaKnown RBP14.02□□□□□ -0.16
DDX41-208ENST00000507955 ZNF682O95780 498 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 DDX6P26196 483 aaKnown RBP eCLIP14.02□□□□□ -0.16
DDX41-208ENST00000507955 AP1S2P56377 157 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 BNIP3Q12983 259 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 GGTA1PQ4G0N0 100 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 METTL2BQ6P1Q9 378 aaKnown RBP14.02□□□□□ -0.16
DDX41-208ENST00000507955 CRTC3Q6UUV7 619 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 Q6ZNX1 250 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 DPPA4Q7L190 304 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 TRAPPC5Q8IUR0 188 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 TCAIMQ8N3R3 496 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 WDR20Q8TBZ3 569 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 ARRDC3Q96B67 414 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms