RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 LACRTQ9GZZ8 138 aa20.05■□□□□ 0.8
SQSTM1-210ENST00000506042 C19orf25Q9UFG5 118 aaPredicted RBP20.05■□□□□ 0.8
SQSTM1-210ENST00000506042 PACSIN2Q9UNF0 486 aaPredicted RBP20.05■□□□□ 0.8
SQSTM1-210ENST00000506042 R3HDM2Q9Y2K5 976 aaKnown RBP20.05■□□□□ 0.8
SQSTM1-210ENST00000506042 IGLV3-12A0A075B6K2 115 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 PRICKLE3O43900 615 aaPredicted RBP20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 CTSVO60911 334 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 RASAL1O95294 804 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 ESR1P03372 595 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 CYC1P08574 325 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 EZRP15311 586 aaKnown RBP20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 AVPR1BP47901 424 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 TNFSF10P50591 281 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 TSTA3Q13630 321 aaPredicted RBP20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 ARMC3Q5W041 872 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 ATG9BQ674R7 924 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 SP5Q6BEB4 398 aaPredicted RBP20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 GSTA5Q7RTV2 222 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 RNF10Q8N5U6 811 aaKnown RBP20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 CSNK1A1LQ8N752 337 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 OR2A1Q8NGT9 310 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 MMABQ96EY8 250 aaPredicted RBP20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 HES6Q96HZ4 224 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 DRC3Q9H069 523 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 RNF32Q9H0A6 362 aa20.04■□□□□ 0.8
SQSTM1-210ENST00000506042 OR2A25A4D2G3 310 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 CHRM3P20309 590 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 PTGER4P35408 488 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 BDKRB1P46663 353 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 SESN2P58004 480 aaPredicted RBP20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 BASP1P80723 227 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 CDK16Q00536 496 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 OASLQ15646 514 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 FRMPD2BQ6IN97 320 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 ACRBPQ8NEB7 543 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 OR9A1PQ8NGU1 263 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 ATG4AQ8WYN0 398 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 TUBB6Q9BUF5 446 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 P2RY12Q9H244 342 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 CCDC68Q9H2F9 335 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 CHRAC1Q9NRG0 131 aa20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 SPENQ96T58 3664 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-210ENST00000506042 TRGV8A0A0C4DH27 118 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 KLHL18O94889 574 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 PSMB5P28074 263 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 ABATP80404 500 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 RELAQ04206 551 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 SEMA3AQ14563 771 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 GDF7Q7Z4P5 450 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 ADCK2Q7Z695 626 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 LKAAEAR1Q8TD35 194 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 BRIX1Q8TDN6 353 aaKnown RBP20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 ZNF778Q96MU6 729 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 ACAT2Q9BWD1 397 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 TGIF2Q9GZN2 237 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 SEC14L3Q9UDX4 400 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 DOCK10Q96BY6 2186 aa20.02■□□□□ 0.8
SQSTM1-210ENST00000506042 IGHV1-45A0A0A0MS14 117 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 A0A1W2PQ72 361 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 COX6A1P12074 109 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 ZNF75DP51815 510 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 ADARP55265 1226 aaKnown RBP20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 VWA2Q5GFL6 755 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 THEMIS2Q5TEJ8 643 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 RAD9BQ6WBX8 426 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 LDB1Q86U70 411 aaPredicted RBP20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 ZNF808Q8N4W9 903 aaPredicted RBP20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 SIRT6Q8N6T7 355 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 CATSPER1Q8NEC5 780 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 C8orf44Q96CB5 159 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 PLCD4Q9BRC7 762 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 ZKSCAN5Q9Y2L8 839 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 NFS1Q9Y697 457 aa20.01■□□□□ 0.79
SQSTM1-210ENST00000506042 LOC105369274A0A096LPK9 316 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 LOC102723532A0A0G2JNH3 316 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 OR5H15A6NDH6 313 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 H0YGG7 62 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 HRH2P25021 359 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 SMSP52788 366 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 ARF3P61204 181 aaPredicted RBP20■□□□□ 0.79
SQSTM1-210ENST00000506042 EEF1A2Q05639 463 aaKnown RBP20■□□□□ 0.79
SQSTM1-210ENST00000506042 Q0VFX4 171 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 SNX1Q13596 522 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 FAM53BQ14153 422 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 PRTGQ2VWP7 1150 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 MFSD4BQ5TF39 518 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 SLC13A5Q86YT5 568 aaPredicted RBP20■□□□□ 0.79
SQSTM1-210ENST00000506042 MCEMP1Q8IX19 187 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 OR4N4Q8N0Y3 316 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 HORMAD2Q8N7B1 307 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 HOMER3Q9NSC5 361 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 SAMD15Q9P1V8 674 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 MKL2Q9ULH7 1088 aa20■□□□□ 0.79
SQSTM1-210ENST00000506042 REXO2Q9Y3B8 237 aaKnown RBP20■□□□□ 0.79
SQSTM1-210ENST00000506042 CCL21O00585 134 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 UNC5CO95185 931 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 MATN4O95460 622 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 C8orf89P0DMQ9 161 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 ESRRAP11474 423 aaPredicted RBP19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 OGNP20774 298 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms