RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 LDLRAP1Q5SW96 308 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 CCDC122Q5T0U0 273 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 FKBP15Q5T1M5 1219 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 MFSD4BQ5TF39 518 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 METRNLQ641Q3 311 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 PDPK2PQ6A1A2 396 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 FCRL6Q6DN72 434 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 MTFR2Q6P444 385 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 UNC5AQ6ZN44 842 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 LANCL3Q6ZV70 420 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 CXXC5Q7LFL8 322 aaKnown RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 TMC3Q7Z5M5 1100 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 FGD2Q7Z6J4 655 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 SPPL2CQ8IUH8 684 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 CCDC50Q8IVM0 306 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 KBTBD2Q8IY47 623 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 PQLC3Q8N755 202 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 CHDHQ8NE62 594 aaPredicted RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 IPMKQ8NFU5 416 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 OR13C4Q8NGS5 318 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 DNAJB8Q8NHS0 232 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 SUN3Q8TAQ9 357 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 ABHD4Q8TB40 342 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 STT3BQ8TCJ2 826 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 ZFPM2Q8WW38 1151 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 PSMF1Q92530 271 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 FKBP10Q96AY3 582 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 HDAC11Q96DB2 347 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 GPR137Q96N19 417 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 FRMD6Q96NE9 622 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 OR2A14Q96R47 310 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 DPH2Q9BQC3 489 aaPredicted RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 FICDQ9BVA6 458 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 AP1M1Q9BXS5 423 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 ENKD1Q9H0I2 346 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 NPHS2Q9NP85 383 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 CUTCQ9NTM9 273 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 EURLQ9NYK6 297 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 IMPACTQ9P2X3 320 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 NFKBIL1Q9UBC1 381 aaPredicted RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 TNFRSF10DQ9UBN6 386 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 ST6GALNAC2Q9UJ37 374 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 CRLS1Q9UJA2 301 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 GNPTGQ9UJJ9 305 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 C3orf18Q9UK00 162 aa3.45□□□□□ -1.86
USP46-205ENST00000504078 RPL26L1Q9UNX3 145 aaKnown RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 RUVBL2Q9Y230 463 aaKnown RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 RPH3AQ9Y2J0 694 aaPredicted RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 MRPS2Q9Y399 296 aaKnown RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 PRRC2CQ9Y520 2896 aaKnown RBP3.45□□□□□ -1.86
USP46-205ENST00000504078 MTORP42345 2549 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 POLEQ07864 2286 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 PRRC2AP48634 2157 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 IGHV1-45A0A0A0MS14 117 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 A0A0J9YVX5 310 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 A0A0U1RQJ8 604 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 RGSL1A5PLK6 1076 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 OR2W5A6NFC9 320 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 A8MUI8 341 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 LGALS16A8MUM7 142 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 EIF3CLB5ME19 914 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 INAFM1C9JVW0 142 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 MATN2O00339 956 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 IFRD1O00458 451 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 DDX3XO00571 662 aaKnown RBP eCLIP3.44□□□□□ -1.86
USP46-205ENST00000504078 DSCR3O14972 297 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 KLHL41O60662 606 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 USP1O94782 785 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 TSPAN12O95859 305 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 FTLP02792 175 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 TPBGLP0DKB5 382 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 TNNT1P13805 278 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ZNF16P17020 682 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 BDKRB1P46663 353 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 HCAR3P49019 387 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 PRLHRP49683 370 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 RAB28P51157 221 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 WNT3AP56704 352 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 GPR85P60893 370 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ADAM8P78325 824 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 OC90Q02509 493 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 UBXN1Q04323 297 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 FOLH1Q04609 750 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 TFF3Q07654 80 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 PAFAH1B3Q15102 231 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 PCOLCEQ15113 449 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 OR1C1Q15619 314 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 BCL7AQ4VC05 210 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 SYTL3Q4VX76 610 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ABHD17BQ5VST6 288 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 FRMPD2BQ6IN97 320 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 RPUSD3Q6P087 351 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 SARM1Q6SZW1 724 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 KDELC1Q6UW63 502 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 FAM214BQ7L5A3 538 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 OVCH1Q7RTY7 1134 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ZNF571Q7Z3V5 609 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 GALNTL5Q7Z4T8 443 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 DOLPP1Q86YN1 238 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms