RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 ZNF415Q09FC8 603 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 UGT3A2Q3SY77 523 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 TMEM35AQ53FP2 167 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 IFI44LQ53G44 452 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 PHLDA2Q53GA4 152 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 TDRD12Q587J7 1177 aaKnown RBP4.53□□□□□ -1.68
SCLT1-206ENST00000503565 TOR1AIP1Q5JTV8 583 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 SPDYCQ5MJ68 293 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 MORN5Q5VZ52 161 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 FAM166AQ6J272 317 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 ISLR2Q6UXK2 745 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 ASB18Q6ZVZ8 466 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 BTN2A1Q7KYR7 527 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 ANKRD33Q7Z3H0 272 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 ZNF410Q86VK4 478 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 NLRP14Q86W24 1093 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 TMEM219Q86XT9 240 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 LMNTD2Q8IXW0 634 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 CFAP206Q8IYR0 622 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 RBMXL3Q8N7X1 1067 aaKnown RBP4.53□□□□□ -1.68
SCLT1-206ENST00000503565 RASGEF1AQ8N9B8 481 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 CLEC1AQ8NC01 280 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 OR52E1Q8NGJ3 308 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 PRCCQ92733 491 aaPredicted RBP4.53□□□□□ -1.68
SCLT1-206ENST00000503565 P2RX5Q93086 422 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 MYADMQ96S97 322 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 ZNF559Q9BR84 538 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 ATG101Q9BSB4 218 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 TM6SF1Q9BZW5 370 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 KRT23Q9C075 422 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 DCLK3Q9C098 648 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 SNX25Q9H3E2 840 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 LIN28AQ9H9Z2 209 aaKnown RBP4.53□□□□□ -1.68
SCLT1-206ENST00000503565 HMG20BQ9P0W2 317 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 ACTR3BQ9P1U1 418 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 TRMT6Q9UJA5 497 aaKnown RBP4.53□□□□□ -1.68
SCLT1-206ENST00000503565 BLOC1S6Q9UL45 172 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 KCNS2Q9ULS6 477 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 KCNK6Q9Y257 313 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 TDRKHQ9Y2W6 561 aaKnown RBP4.53□□□□□ -1.68
SCLT1-206ENST00000503565 JRKLQ9Y4A0 524 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 TET3O43151 1660 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 ARHGAP31Q2M1Z3 1444 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 IQGAP3Q86VI3 1631 aa4.53□□□□□ -1.68
SCLT1-206ENST00000503565 VWDEQ8N2E2 1590 aa4.53□□□□□ -1.69
SCLT1-206ENST00000503565 EFCAB6Q5THR3 1501 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 LMTK2Q8IWU2 1503 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 TAF1P21675 1872 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 ERVK-7P63135 1459 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 RGSL1A5PLK6 1076 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 C15orf62A8K5M9 175 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 PRSS46E5RG02 174 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 GAPDHSO14556 408 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 BUD23O43709 281 aaKnown RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 TOM1O60784 492 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 ATP9AO75110 1047 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 CRCPO75575 148 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 IGHDP01880 384 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 C9P02748 559 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 LIPFP07098 398 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 CCNA2P20248 432 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 AHCYP23526 432 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 HOXD3P31249 432 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 NKX2-1P43699 371 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 IER3P46695 156 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 NPBWR1P48145 328 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 ATXN3P54252 364 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 SRSF4Q08170 494 aaKnown RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 NFATC4Q14934 902 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 RABEP1Q15276 862 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 MTX3Q5HYI7 312 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 EFHC1Q5JVL4 640 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 ELFN2Q5R3F8 820 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 KCTD11Q693B1 232 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 GALNT17Q6IS24 598 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 C11orf63Q6NUN7 778 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 C8orf82Q6P1X6 216 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 COLCA1Q6ZS62 124 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 EXOC3L1Q86VI1 746 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 EGFL6Q8IUX8 553 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 KLHDC8AQ8IYD2 350 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 ARL6IP6Q8N6S5 226 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 ZNF114Q8NC26 417 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 KIAA0895Q8NCT3 520 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 CNNM3Q8NE01 707 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 UBLCP1Q8WVY7 318 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 FAM71F1Q96KD3 344 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 RBM38Q9H0Z9 239 aaKnown RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 CSTL1Q9H114 145 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 TRPC7Q9HCX4 862 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 PHPT1Q9NRX4 125 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 GKN1Q9NS71 199 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 ZNF701Q9NV72 531 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 SIX4Q9UIU6 781 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 HOOK1Q9UJC3 728 aaKnown RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 MYO3AQ8NEV4 1616 aa4.52□□□□□ -1.69
SCLT1-206ENST00000503565 CEP170BQ9Y4F5 1589 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-206ENST00000503565 RPRD2Q5VT52 1461 aaKnown RBP4.51□□□□□ -1.69
SCLT1-206ENST00000503565 NLRP1Q9C000 1473 aa4.51□□□□□ -1.69
SCLT1-206ENST00000503565 ILVBLA1L0T0 632 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms