RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PTBP2Q9UKA9 531 aaKnown RBP24.1■■□□□ 1.45
LSM6-202ENST00000502781 SNX7Q9UNH6 387 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 SH2B3Q9UQQ2 575 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 ANKRD11Q6UB99 2663 aaPredicted RBP24.1■■□□□ 1.45
LSM6-202ENST00000502781 SPTBP11277 2137 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 NCF1BA6NI72 391 aaPredicted RBP24.09■■□□□ 1.45
LSM6-202ENST00000502781 NCF1CA8MVU1 366 aaPredicted RBP24.09■■□□□ 1.45
LSM6-202ENST00000502781 TAPBPO15533 448 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 LIPCP11150 499 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 NCF1P14598 390 aaPredicted RBP24.09■■□□□ 1.45
LSM6-202ENST00000502781 C18orf21Q32NC0 220 aaPredicted RBP24.09■■□□□ 1.45
LSM6-202ENST00000502781 SULT1C3Q6IMI6 304 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 FBXO42Q6P3S6 717 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 KLC3Q6P597 504 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 C17orf64Q86WR6 236 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 MCATQ8IVS2 390 aaKnown RBP24.09■■□□□ 1.45
LSM6-202ENST00000502781 ACMSDQ8TDX5 336 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 EPS8L3Q8TE67 593 aaKnown RBP24.09■■□□□ 1.45
LSM6-202ENST00000502781 TMEM79Q9BSE2 394 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 ULBP3Q9BZM4 244 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 TMEM184CQ9NVA4 438 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 ZNF358Q9NW07 568 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 NUDT4Q9NZJ9 180 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 TBK1Q9UHD2 729 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 SSUH2Q9Y2M2 353 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 PCDHB3Q9Y5E6 796 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 CELSR3Q9NYQ7 3312 aa24.09■■□□□ 1.45
LSM6-202ENST00000502781 CDH16O75309 829 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 SLCO1A2P46721 670 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 GLRBP48167 497 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 ITGA1P56199 1179 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 TSNAXIP1Q2TAA8 658 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 TECRLQ5HYJ1 363 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 TIPARPQ7Z3E1 657 aaKnown RBP24.08■■□□□ 1.45
LSM6-202ENST00000502781 THOC6Q86W42 341 aaKnown RBP24.08■■□□□ 1.45
LSM6-202ENST00000502781 ABHD11Q8NFV4 315 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 OR2W6PQ8NHA6 318 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 CD274Q9NZQ7 290 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 ZMIZ1Q9ULJ6 1067 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 DMXL2Q8TDJ6 3036 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 HEATR5BQ9P2D3 2071 aa24.08■■□□□ 1.45
LSM6-202ENST00000502781 A0A087WV48 116 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 H7BY64 318 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 KLK8O60259 260 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 IPO13O94829 963 aaKnown RBP24.07■■□□□ 1.44
LSM6-202ENST00000502781 KIAA0754O94854 1291 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 CTSBP07858 339 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 CLN3Q13286 438 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 MAP7Q14244 749 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 SH2D5Q6ZV89 423 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 CYP4X1Q8N118 509 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 KCNE4Q8WWG9 221 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 ALKBH8Q96BT7 664 aaKnown RBP24.07■■□□□ 1.44
LSM6-202ENST00000502781 PRAP1Q96NZ9 151 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 ZFYVE21Q9BQ24 234 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 DPH1Q9BZG8 443 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 SLC22A14Q9Y267 594 aa24.07■■□□□ 1.44
LSM6-202ENST00000502781 SYCE1LA8MT33 242 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 UBXN8O00124 270 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 SRPX2O60687 465 aaPredicted RBP24.06■■□□□ 1.44
LSM6-202ENST00000502781 SCRG1O75711 98 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 RBP1P09455 135 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 EZRP15311 586 aaKnown RBP24.06■■□□□ 1.44
LSM6-202ENST00000502781 GDF5P43026 501 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 GCGRP47871 477 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 CSNK1G2P78368 415 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 PRAMEF17Q5VTA0 474 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 LCA5Q86VQ0 697 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 TMEM126BQ8IUX1 230 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 UBTD2Q8WUN7 234 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 N4BP2L2Q92802 583 aaPredicted RBP24.06■■□□□ 1.44
LSM6-202ENST00000502781 NKD1Q969G9 470 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 ROPN1BQ9BZX4 212 aaPredicted RBP24.06■■□□□ 1.44
LSM6-202ENST00000502781 CNOT10Q9H9A5 744 aaKnown RBP24.06■■□□□ 1.44
LSM6-202ENST00000502781 ROPN1Q9HAT0 212 aaPredicted RBP24.06■■□□□ 1.44
LSM6-202ENST00000502781 PCMTD2Q9NV79 361 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 EPG5Q9HCE0 2579 aa24.06■■□□□ 1.44
LSM6-202ENST00000502781 E7EQ34 232 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 MAP2K7O14733 419 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 OR2B3O76000 313 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 TGIF1Q15583 401 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 FRMPD2BQ6IN97 320 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 TLDC1Q6P9B6 456 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 GPR135Q8IZ08 494 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 RIBC1Q8N443 379 aaPredicted RBP24.05■■□□□ 1.44
LSM6-202ENST00000502781 TMEM151AQ8N4L1 468 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 SLC38A9Q8NBW4 561 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 OR4K1Q8NGD4 311 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 EXT2Q93063 718 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 NEIL2Q969S2 332 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 LRFN5Q96NI6 719 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 OR2A5Q96R48 311 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 TMEM109Q9BVC6 243 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 SPRTNQ9H040 489 aaPredicted RBP24.05■■□□□ 1.44
LSM6-202ENST00000502781 SYNPO2LQ9H987 977 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 WWOXQ9NZC7 414 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 USP24Q9UPU5 2620 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 SEC16AO15027 2179 aa24.05■■□□□ 1.44
LSM6-202ENST00000502781 A0A0J9YVX5 310 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 A0A1W2PPM1 405 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms