RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 IL10P22301 178 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 CDH11P55287 796 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 GCNT1Q02742 428 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 LGALS3BPQ08380 585 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 ARL16Q0P5N6 197 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 UGCGQ16739 394 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 ANKRD20A4Q4UJ75 823 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 ANKRD20A8PQ5CZ79 823 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 ANKRD20A2Q5SQ80 823 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 ANKRD20A1Q5TYW2 823 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 ANKRD20A3Q5VUR7 823 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 PRSS55Q6UWB4 352 aaPredicted RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 ENPP7Q6UWV6 458 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 C15orf39Q6ZRI6 1047 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 BTN2A1Q7KYR7 527 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 NRARPQ7Z6K4 114 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 RTN4RL2Q86UN3 420 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 HOOK3Q86VS8 718 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 POC1AQ8NBT0 407 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 OR13A1Q8NGR1 328 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 FCAMRQ8WWV6 532 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 PROX1Q92786 737 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 DNASE1L2Q92874 299 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 THOC1Q96FV9 657 aaKnown RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 SENP5Q96HI0 755 aaPredicted RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 PARK7Q99497 189 aaKnown RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 ACAT2Q9BWD1 397 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 CACNG6Q9BXT2 260 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 SHARPINQ9H0F6 387 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 TFB2MQ9H5Q4 396 aaKnown RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 ZFP57Q9NU63 452 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 ERAP1Q9NZ08 941 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 XPO7Q9UIA9 1087 aaKnown RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 FAF1Q9UNN5 650 aaPredicted RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 HBS1LQ9Y450 684 aaKnown RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 ATP6V0A2Q9Y487 856 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 LOC101059948A0A1B0GTJ6 334 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 C16orf97H3BN30 126 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 ZBTB14O43829 449 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 LMX1BO60663 402 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 NR3C1P04150 777 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 INHBAP08476 426 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 ANKRD34CP0C6C1 535 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 EEF2P13639 858 aaKnown RBP3.39□□□□□ -1.87
CLK1-214ENST00000496205 HPDP32754 393 aaPredicted RBP3.39□□□□□ -1.87
CLK1-214ENST00000496205 VEGFCP49767 419 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 PDX1P52945 283 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 MFAP3P55082 362 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 GAGE5Q13069 117 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 GAGE6Q13070 117 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 TRIM29Q14134 588 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 SLC25A53Q5H9E4 307 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 LRRC73Q5JTD7 316 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 CYP4A22Q5TCH4 519 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 SFMBT2Q5VUG0 894 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 C11orf63Q6NUN7 778 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 PODNL1Q6PEZ8 512 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 LINC00696Q6ZRV3 163 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 C9orf139Q6ZV77 190 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 TIGD4Q8IY51 512 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 DNAJC22Q8N4W6 341 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 KLHDC1Q8N7A1 406 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 RASGEF1AQ8N9B8 481 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 CTCFLQ8NI51 663 aaPredicted RBP3.39□□□□□ -1.87
CLK1-214ENST00000496205 CCDC107Q8WV48 283 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 BSCL2Q96G97 398 aaPredicted RBP3.39□□□□□ -1.87
CLK1-214ENST00000496205 ST6GAL2Q96JF0 529 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 CABS1Q96KC9 395 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 IWS1Q96ST2 819 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 FSD1Q9BTV5 496 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 EGLN1Q9GZT9 426 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 MMADHCQ9H3L0 296 aaPredicted RBP3.39□□□□□ -1.87
CLK1-214ENST00000496205 TLE6Q9H808 572 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 FKRPQ9H9S5 495 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 IL1RAPL2Q9NP60 686 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 MID1IP1Q9NPA3 183 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 SDR39U1Q9NRG7 319 aaPredicted RBP3.39□□□□□ -1.87
CLK1-214ENST00000496205 INTS10Q9NVR2 710 aaKnown RBP3.39□□□□□ -1.87
CLK1-214ENST00000496205 TAAR2Q9P1P5 351 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 ARMCX3Q9UH62 379 aaPredicted RBP3.39□□□□□ -1.87
CLK1-214ENST00000496205 ZDHHC2Q9UIJ5 367 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 CDH7Q9ULB5 785 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 SLC7A7Q9UM01 511 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 IKBKGQ9Y6K9 419 aa3.39□□□□□ -1.87
CLK1-214ENST00000496205 TRAV24A0A0B4J272 114 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 LRRD1A4D1F6 860 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 YDJCA8MPS7 323 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 H0YIG0 161 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 IFIT3O14879 490 aaKnown RBP3.38□□□□□ -1.87
CLK1-214ENST00000496205 KERAO60938 352 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 SEC22BO75396 215 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 MOCS3O95396 460 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 RLN1P04808 185 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 SERPING1P05155 500 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 VIMP08670 466 aaKnown RBP3.38□□□□□ -1.87
CLK1-214ENST00000496205 SPP1P10451 314 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 IRF2P14316 349 aa3.38□□□□□ -1.87
CLK1-214ENST00000496205 MAPK3P27361 379 aaPredicted RBP3.38□□□□□ -1.87
CLK1-214ENST00000496205 ALDH1B1P30837 517 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms