RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 PPP2CAP67775 309 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 RAE1P78406 368 aaKnown RBP10.29□□□□□ -0.76
CLCN6-208ENST00000494028 PLIN5Q00G26 463 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 TAP2Q03519 686 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 KLC1Q07866 573 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 MAPKAPK3Q16644 382 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 UGT8Q16880 541 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 CATSPEREQ5SY80 951 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 ATG9BQ674R7 924 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 MED27Q6P2C8 311 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 LCTLQ6UWM7 567 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 EP400NLQ6ZTU2 488 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 AMZ2Q86W34 360 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 EPHX4Q8IUS5 362 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 SYT12Q8IV01 421 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 DTWD1Q8N5C7 304 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 OR7G3Q8NG95 312 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 CANT1Q8WVQ1 401 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 SLC5A11Q8WWX8 675 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 KLK6Q92876 244 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 MTERF1Q99551 399 aaKnown RBP10.29□□□□□ -0.76
CLCN6-208ENST00000494028 TIMM29Q9BSF4 260 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 MENTQ9BUN1 341 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 EHD1Q9H4M9 534 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 RPF2Q9H7B2 306 aaKnown RBP10.29□□□□□ -0.76
CLCN6-208ENST00000494028 DMRT3Q9NQL9 472 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 PHPT1Q9NRX4 125 aaPredicted RBP10.29□□□□□ -0.76
CLCN6-208ENST00000494028 SLC6A13Q9NSD5 602 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 FBXL12Q9NXK8 326 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 RUVBL1Q9Y265 456 aaKnown RBP10.29□□□□□ -0.76
CLCN6-208ENST00000494028 ASF1AQ9Y294 204 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 OR1A2Q9Y585 309 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 KCNE2Q9Y6J6 123 aa10.29□□□□□ -0.76
CLCN6-208ENST00000494028 PRR23AA6NEV1 266 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 EIF4E1BA6NMX2 242 aaKnown RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 KMOO15229 486 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 LRATO95237 230 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 DNTTP04053 509 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 SLC35G4P0C7Q5 338 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 C1GALT1C1LP0DN25 315 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 C7P10643 843 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 GGT1P19440 569 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 KELP23276 732 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 PSMA4P25789 261 aaKnown RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 PTPN6P29350 595 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 TIA1P31483 386 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 S100A3P33764 101 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 TRIM23P36406 574 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 CDKN2CP42773 168 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 POLE2P56282 527 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 RPS13P62277 151 aaKnown RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 RPS21P63220 83 aaKnown RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 MRPS35P82673 323 aaKnown RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 ACSM2AQ08AH3 577 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 PON2Q15165 354 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 DPY19L1Q2PZI1 675 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 RUNDC3AQ59EK9 446 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 TBCELQ5QJ74 424 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 ACSM2BQ68CK6 577 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 GPR155Q7Z3F1 870 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 IFNEQ86WN2 208 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 HORMAD1Q86X24 394 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 SPPL2CQ8IUH8 684 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 LAS2Q8IYD9 372 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 C1orf52Q8N6N3 182 aaKnown RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 ANKFN1Q8N957 763 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 ICA1LQ8NDH6 482 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 DNAJB8Q8NHS0 232 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 HUS1BQ8NHY5 278 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 REPS1Q96D71 796 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 METTL2AQ96IZ6 378 aaKnown RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 EGLN2Q96KS0 407 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 OR52E6Q96RD3 313 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 INPP5KQ9BT40 448 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 EFHD1Q9BUP0 239 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 OSBPL6Q9BZF3 934 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 KCNH6Q9H252 994 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 ZNF576Q9H609 170 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 PREBQ9HCU5 417 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 CCM2LQ9NUG4 571 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 GEMIN8Q9NWZ8 242 aaKnown RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 LMCD1Q9NZU5 365 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 VPS29Q9UBQ0 182 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 PCDHGA11Q9Y5H2 935 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 DNMT3AQ9Y6K1 912 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-208ENST00000494028 PIAS3Q9Y6X2 628 aa10.28□□□□□ -0.76
CLCN6-208ENST00000494028 SNRNP200O75643 2136 aaKnown RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 KANSL1LA0AUZ9 987 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 KLHL33A6NCF5 533 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 C2CD4DB7Z1M9 353 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 SCAMP2O15127 329 aaKnown RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 PCDH7O60245 1069 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 ERN1O75460 977 aaKnown RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 ANXA6P08133 673 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 CDH1P12830 882 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 ACP5P13686 325 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 NPPBP16860 134 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 WNT3P56703 355 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 REEP5Q00765 189 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 TSTA3Q13630 321 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms