RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	ZFYVE21	Q9BQ24	234 aa		13.01	□□□□□ -0.33
SAMM50-204	ENST00000493161	TSSK1B	Q9BXA7	367 aa		13.01	□□□□□ -0.33
SAMM50-204	ENST00000493161	RAB11FIP5	Q9BXF6	653 aa		13.01	□□□□□ -0.33
SAMM50-204	ENST00000493161	P2RY12	Q9H244	342 aa		13.01	□□□□□ -0.33
SAMM50-204	ENST00000493161	RUVBL1	Q9Y265	456 aa	Known RBP	13.01	□□□□□ -0.33
SAMM50-204	ENST00000493161	HIVEP1	P15822	2718 aa		13.01	□□□□□ -0.33
SAMM50-204	ENST00000493161	C2CD3	Q4AC94	2353 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	IGKV1-8	A0A0C4DH67	115 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	SOWAHD	A6NJG2	315 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161		F8W8V4	182 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	PRMT5	O14744	637 aa	Predicted RBP	13	□□□□□ -0.33
SAMM50-204	ENST00000493161	SUN1	O94901	812 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	FKBP9	O95302	570 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	CRYAB	P02511	175 aa	Known RBP	13	□□□□□ -0.33
SAMM50-204	ENST00000493161	HEXB	P07686	556 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	UQCRH	P07919	91 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	ERVK-10	P10266	1014 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	FDXR	P22570	491 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	CXCR2	P25025	360 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	ADRA1D	P25100	572 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	SLC26A3	P40879	764 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	CETN2	P41208	172 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	MAT1A	Q00266	395 aa	Known RBP	13	□□□□□ -0.33
SAMM50-204	ENST00000493161	DSG2	Q14126	1118 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	TMED2	Q15363	201 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	C3AR1	Q16581	482 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	PTRHD1	Q6GMV3	140 aa	Known RBP	13	□□□□□ -0.33
SAMM50-204	ENST00000493161	TTC23L	Q6PF05	361 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	SUSD1	Q6UWL2	747 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	PPP1R21	Q6ZMI0	780 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13	□□□□□ -0.33
SAMM50-204	ENST00000493161	NEK10	Q6ZWH5	1172 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	SPNS2	Q8IVW8	549 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	CCDC170	Q8IYT3	715 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	ARHGEF39	Q8N4T4	335 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	MMAB	Q96EY8	250 aa	Predicted RBP	13	□□□□□ -0.33
SAMM50-204	ENST00000493161	IMMP1L	Q96LU5	166 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZNF700	Q9H0M5	742 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	CHST11	Q9NPF2	352 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	CHRAC1	Q9NRG0	131 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	RIC8B	Q9NVN3	520 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	STMN3	Q9NZ72	180 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	TINAG	Q9UJW2	476 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	RIMKLB	Q9ULI2	386 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	TCAF1	Q9Y4C2	921 aa		13	□□□□□ -0.33
SAMM50-204	ENST00000493161	LOC102723996	A0A087X1L8	192 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161		A0A0A6YYC8	382 aa	Predicted RBP	12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	IGHV3-20	A0A0C4DH32	117 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	OR5H15	A6NDH6	313 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161		I3L1I5	382 aa	Predicted RBP	12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZNHIT1	O43257	154 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	FOXS1	O43638	330 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	SLC19A2	O60779	497 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	PRAMEF2	O60811	474 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	PTMA	P06454	111 aa	Known RBP	12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	ETS1	P14921	441 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	KIR3DL1	P43629	444 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	PRAME	P78395	509 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZNF33B	Q06732	778 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	CTSL3P	Q5NE16	218 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	FCRLB	Q6BAA4	426 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	LRRC8B	Q6P9F7	803 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	TMEM205	Q6UW68	189 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	RPTN	Q6XPR3	784 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	RIPOR1	Q6ZS17	1223 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	PAQR7	Q86WK9	346 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZC3H7A	Q8IWR0	971 aa	Known RBP	12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	CSNK1A1L	Q8N752	337 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	DNAJB8	Q8NHS0	232 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	ADAMTS18	Q8TE60	1221 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	FAM136A	Q96C01	138 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	PLCD4	Q9BRC7	762 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	RNF32	Q9H0A6	362 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	CATSPERZ	Q9NTU4	200 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	GALP	Q9UBC7	116 aa		12.99	□□□□□ -0.33
SAMM50-204	ENST00000493161	GOLGA6L9	A6NEM1	432 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	OR2W5	A6NFC9	320 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161		A8MUI8	341 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	CD3EAP	O15446	510 aa	Known RBP	12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	P2RX6	O15547	441 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	ZNF189	O75820	626 aa	Predicted RBP	12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	STATH	P02808	62 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	CMPK1	P30085	196 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	CYLC1	P35663	651 aa	Predicted RBP	12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	CRADD	P78560	199 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	ABHD17B	Q5VST6	288 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	OTOA	Q7RTW8	1153 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	GSDMB	Q8TAX9	411 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	OR2A5	Q96R48	311 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	HES7	Q9BYE0	225 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	TGIF2	Q9GZN2	237 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	MKKS	Q9NPJ1	570 aa	Predicted RBP	12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	C14orf105	Q9NVL8	296 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	ANAPC5	Q9UJX4	755 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	MKL2	Q9ULH7	1088 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	CDC14A	Q9UNH5	594 aa		12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.98	□□□□□ -0.33
SAMM50-204	ENST00000493161	PKDREJ	Q9NTG1	2253 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms