RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 OR4A47Q6IF82 309 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 SLC30A6Q6NXT4 461 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 FAAP20Q6NZ36 180 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 TMED8Q6PL24 325 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-206ENST00000489868 STXBP4Q6ZWJ1 553 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 TLK2Q86UE8 772 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 GTSCR1Q86UQ5 136 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 CATSPERDQ86XM0 798 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 SLC37A3Q8NCC5 494 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 OR6J1Q8NGC5 347 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 ZNF519Q8TB69 540 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 ROBO4Q8WZ75 1007 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 SLCO2A1Q92959 643 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 MAP3K3Q99759 626 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 FAM129AQ9BZQ8 928 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 CHST11Q9NPF2 352 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 SPHK2Q9NRA0 654 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 BCCIPQ9P287 314 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCDC39-206ENST00000489868 MAN1B1Q9UKM7 699 aa4.39□□□□□ -1.71
CCDC39-206ENST00000489868 ERI2A8K979 691 aaKnown RBP4.38□□□□□ -1.71
CCDC39-206ENST00000489868 E9PQ18 207 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 TBX10O75333 385 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 FYNP06241 537 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 RAB28P51157 221 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 DNA2P51530 1060 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 XGP55808 180 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 CALD1Q05682 793 aaKnown RBP4.38□□□□□ -1.71
CCDC39-206ENST00000489868 PRPF4BQ13523 1007 aaKnown RBP4.38□□□□□ -1.71
CCDC39-206ENST00000489868 KRT39Q6A163 491 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 DOK6Q6PKX4 331 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 KRT74Q7RTS7 529 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 NDUFAF2Q8N183 169 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 TTC30BQ8N4P2 665 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 RASGEF1AQ8N9B8 481 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 KCNE4Q8WWG9 221 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 PROX1Q92786 737 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 HDAC11Q96DB2 347 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 ZNF300Q96RE9 604 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-206ENST00000489868 PRRG4Q9BZD6 226 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 TMX4Q9H1E5 349 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-206ENST00000489868 FZD8Q9H461 694 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 TBC1D7Q9P0N9 293 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 CHKBQ9Y259 395 aa4.38□□□□□ -1.71
CCDC39-206ENST00000489868 MYH15Q9Y2K3 1946 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 A0A087WUV0 522 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-206ENST00000489868 IGKV3D-20A0A0C4DH25 116 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-206ENST00000489868 C2CD4DB7Z1M9 353 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 TEX28O15482 410 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 ATP1B1P05026 303 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 KRT20P35900 424 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 HNF4AP41235 474 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 GSCP56915 257 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-206ENST00000489868 LMO4P61968 165 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 TRAP1Q12931 704 aaKnown RBP4.37□□□□□ -1.71
CCDC39-206ENST00000489868 EFTUD2Q15029 972 aaKnown RBP eCLIP4.37□□□□□ -1.71
CCDC39-206ENST00000489868 SUSD4Q5VX71 490 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 CST9LP1Q5W188 147 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 PRSS33Q8NF86 280 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 OR7A2PQ8NGA2 310 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 ANKRD9Q96BM1 317 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-206ENST00000489868 CFAP57Q96MR6 1250 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 SPATA33Q96N06 139 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 ZNF558Q96NG5 402 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 SPAG5Q96R06 1193 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 USP28Q96RU2 1077 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 LPAR4Q99677 370 aa4.37□□□□□ -1.71
CCDC39-206ENST00000489868 C19orf25Q9UFG5 118 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-206ENST00000489868 A8MXE2 369 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 EPM2AB3EWF7 344 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 PI15O43692 258 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 GGPS1O95749 300 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 SOX3P41225 446 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 NONOQ15233 471 aaKnown RBP eCLIP4.36□□□□□ -1.71
CCDC39-206ENST00000489868 KRBOX4Q5JUW0 171 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 LRRTM1Q86UE6 522 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 OR6S1Q8NH40 331 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 C11orf45Q8TAV5 145 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 MAPK15Q8TD08 544 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 PIK3R3Q92569 461 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 AGAP3Q96P47 875 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 NKX3-1Q99801 234 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-206ENST00000489868 PI4K2AQ9BTU6 479 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 UPF3AQ9H1J1 476 aaKnown RBP4.36□□□□□ -1.71
CCDC39-206ENST00000489868 GSN-AS1Q9NRJ2 163 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 SWAP70Q9UH65 585 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 MMP24Q9Y5R2 645 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 HEG1Q9ULI3 1381 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 PCNX3Q9H6A9 2034 aa4.36□□□□□ -1.71
CCDC39-206ENST00000489868 KAT6BQ8WYB5 2073 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 TRAV24A0A0B4J272 114 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 MPTX1A8MV57 137 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 SOCS3O14543 225 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 FIBPO43427 364 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 SNX3O60493 162 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 RPL35AP18077 110 aaKnown RBP4.35□□□□□ -1.71
CCDC39-206ENST00000489868 UGT1A4P22310 534 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 SP100P23497 879 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-206ENST00000489868 CALCOCO2Q13137 446 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 NFATC2Q13469 925 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms