RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 A0A0J9YVX5 310 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 FITM1A5D6W6 292 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 CDC7O00311 574 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 GUCA1CO95843 209 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 RHOXF2BP0C7M4 288 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 CCDC166P0CW27 439 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 VSX2P58304 361 aaPredicted RBP16.62■□□□□ 0.25
MDC1-206ENST00000489540 ATP6V0D1P61421 351 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 DCDP81605 110 aaKnown RBP16.62■□□□□ 0.25
MDC1-206ENST00000489540 CDKL1Q00532 357 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 PPP1R3AQ16821 1122 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 FAM214AQ32MH5 1076 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 WASHC2DQ5SRD0 308 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 TTC29Q8NA56 475 aaPredicted RBP16.62■□□□□ 0.25
MDC1-206ENST00000489540 OR56A3Q8NH54 315 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 RHOXF2Q9BQY4 288 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 HAUS8Q9BT25 410 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 NLNQ9BYT8 704 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 TMEM184CQ9NVA4 438 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 OARD1Q9Y530 152 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 NPEPPSL1A6NEC2 478 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 H7BY64 318 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 PHGDHO43175 533 aaKnown RBP16.61■□□□□ 0.25
MDC1-206ENST00000489540 CREG1O75629 220 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 ACSL3O95573 720 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 ANXA5P08758 320 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 CD63P08962 238 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 EZRP15311 586 aaKnown RBP16.61■□□□□ 0.25
MDC1-206ENST00000489540 NPPBP16860 134 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 ALAS2P22557 587 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 HNMTP50135 292 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 CYP4F2P78329 520 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 EFTUD2Q15029 972 aaKnown RBP eCLIP16.61■□□□□ 0.251e-7■■■■■ 39.6
MDC1-206ENST00000489540 TSNQ15631 228 aaKnown RBP16.61■□□□□ 0.25
MDC1-206ENST00000489540 PTCHD3Q3KNS1 767 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 ZNF385CQ66K41 422 aaPredicted RBP16.61■□□□□ 0.25
MDC1-206ENST00000489540 FRMPD2BQ6IN97 320 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 LCN10Q6JVE6 187 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 LCTLQ6UWM7 567 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 RAPH1Q70E73 1250 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 FRA10AC1Q70Z53 315 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 ADCK2Q7Z695 626 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 CCDC91Q7Z6B0 441 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 C17orf64Q86WR6 236 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 TTC9Q92623 222 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 ALKBH8Q96BT7 664 aaKnown RBP16.61■□□□□ 0.25
MDC1-206ENST00000489540 PRAP1Q96NZ9 151 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 GBP5Q96PP8 586 aa16.61■□□□□ 0.25
MDC1-206ENST00000489540 MRPS18BQ9Y676 258 aaKnown RBP16.61■□□□□ 0.25
MDC1-206ENST00000489540 LOC105369274A0A096LPK9 316 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 LOC102723532A0A0G2JNH3 316 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 C9J4A7 227 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 ATXN7O15265 892 aaPredicted RBP16.6■□□□□ 0.25
MDC1-206ENST00000489540 SLC26A3P40879 764 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 GCGRP47871 477 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 TAF1BQ53T94 588 aaPredicted RBP16.6■□□□□ 0.25
MDC1-206ENST00000489540 C16orf46Q6P387 395 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 SYVN1Q86TM6 617 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 OR4N4Q8N0Y3 316 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 RERGQ96A58 199 aaPredicted RBP16.6■□□□□ 0.25
MDC1-206ENST00000489540 MRRFQ96E11 262 aaKnown RBP16.6■□□□□ 0.25
MDC1-206ENST00000489540 UBXN10Q96LJ8 280 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 DHRS4Q9BTZ2 278 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 ACTL8Q9H568 366 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 STARD5Q9NSY2 213 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 CUTCQ9NTM9 273 aa16.6■□□□□ 0.25
MDC1-206ENST00000489540 DHCR7Q9UBM7 475 aaKnown RBP16.6■□□□□ 0.25
MDC1-206ENST00000489540 RALYQ9UKM9 306 aaKnown RBP16.6■□□□□ 0.25
MDC1-206ENST00000489540 A0A1B0GX78 115 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 HYKKA2RU49 373 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 H0YGG7 62 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 TXNDC9O14530 226 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 NRP2O60462 931 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 EIF2S1P05198 315 aaKnown RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 PRKAR1AP10644 381 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 PIM1P11309 404 aaPredicted RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 CD1DP15813 335 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 EMP3P54852 163 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 ARF3P61204 181 aaPredicted RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 CDC20Q12834 499 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 UAP1Q16222 522 aaPredicted RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 ZXDCQ2QGD7 858 aaPredicted RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 NKAIN1Q4KMZ8 207 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 CDKL4Q5MAI5 379 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 MROH9Q5TGP6 573 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 C1orf189Q5VU69 101 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 TTLL10Q6ZVT0 673 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 TRMT10CQ7L0Y3 403 aaKnown RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 SPATA6LQ8N4H0 392 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 EIF1ADQ8N9N8 165 aaKnown RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 THAP11Q96EK4 314 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 OR2A5Q96R48 311 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 EGFL8Q99944 293 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 CUEDC1Q9NWM3 386 aaPredicted RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 IFT80Q9P2H3 777 aaPredicted RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 GPN3Q9UHW5 284 aaPredicted RBP16.59■□□□□ 0.25
MDC1-206ENST00000489540 IKBKGQ9Y6K9 419 aa16.59■□□□□ 0.25
MDC1-206ENST00000489540 FAM208BQ5VWN6 2430 aa16.58■□□□□ 0.25
MDC1-206ENST00000489540 KCNE1BA0A087WTH5 132 aa16.58■□□□□ 0.24
MDC1-206ENST00000489540 A0A087WUV0 522 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms