RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 COL26A1Q96A83 441 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 PTERQ96BW5 349 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 CERS2Q96G23 380 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 C10orf90Q96M02 699 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 KRT12Q99456 494 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 PLCD4Q9BRC7 762 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 MLXIPLQ9NP71 852 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 KLHL42Q9P2K6 505 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 CDC23Q9UJX2 597 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 SH2B3Q9UQQ2 575 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 PCDHGA9Q9Y5G4 932 aaKnown RBP13.39□□□□□ -0.27
VTI1A-206ENST00000489142 COMMD10Q9Y6G5 202 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 RELNP78509 3460 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 FITM1A5D6W6 292 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 PEX12O00623 359 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 HAT1O14929 419 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 ZBTB14O43829 449 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 TTC4O95801 387 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 ENO3P13929 434 aaPredicted RBP13.38□□□□□ -0.27
VTI1A-206ENST00000489142 IMPA1P29218 277 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 RRADP55042 308 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 ARHGAP19Q14CB8 494 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 FASTKD3Q14CZ7 662 aaKnown RBP13.38□□□□□ -0.27
VTI1A-206ENST00000489142 DCAF10Q5QP82 559 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 SYDE1Q6ZW31 735 aaPredicted RBP13.38□□□□□ -0.27
VTI1A-206ENST00000489142 OVCH1Q7RTY7 1134 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 CNTN4Q8IWV2 1026 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 LRRC56Q8IYG6 542 aaPredicted RBP13.38□□□□□ -0.27
VTI1A-206ENST00000489142 PDIK1LQ8N165 341 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 GPATCH11Q8N954 259 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 FBXO15Q8NCQ5 510 aaPredicted RBP13.38□□□□□ -0.27
VTI1A-206ENST00000489142 FKBP10Q96AY3 582 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 ALKBH8Q96BT7 664 aaKnown RBP13.38□□□□□ -0.27
VTI1A-206ENST00000489142 LINGO1Q96FE5 620 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 SNF8Q96H20 258 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 CABS1Q96KC9 395 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 SPSB2Q99619 263 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 GPR83Q9NYM4 423 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 RUVBL1Q9Y265 456 aaKnown RBP13.38□□□□□ -0.27
VTI1A-206ENST00000489142 DOCK10Q96BY6 2186 aa13.38□□□□□ -0.27
VTI1A-206ENST00000489142 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 ZNF839A8K0R7 811 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 TP73O15350 636 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 P2RX6O15547 441 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 SRPX2O60687 465 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 SEC31AO94979 1220 aaKnown RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 SKIV2L2P42285 1042 aaKnown RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 PAFAH1B1P43034 410 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 RPL21P46778 160 aaKnown RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 CD97P48960 835 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 TBPL1P62380 186 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 SNRPNP63162 240 aaKnown RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 PRDX1Q06830 199 aaKnown RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 HIF1AQ16665 826 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 PHKG1Q16816 387 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 FAM214AQ32MH5 1076 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 PRR30Q53SZ7 412 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 TEDDM1Q5T9Z0 273 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 YOD1Q5VVQ6 348 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 ZNF425Q6IV72 752 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 CAPN12Q6ZSI9 719 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 GALNT16Q8N428 558 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 CSNK1A1LQ8N752 337 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 OLFM1Q99784 485 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 NAT9Q9BTE0 207 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 ATG10Q9H0Y0 220 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 ZNF304Q9HCX3 659 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 TAS2R13Q9NYV9 303 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 FBXL4Q9UKA2 621 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 PDE10AQ9Y233 779 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 SNX24Q9Y343 169 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 ZNF451Q9Y4E5 1061 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 PSAT1Q9Y617 370 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 TEX264Q9Y6I9 313 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 FLNCQ14315 2725 aa13.37□□□□□ -0.27
VTI1A-206ENST00000489142 FLNBO75369 2602 aaKnown RBP13.37□□□□□ -0.27
VTI1A-206ENST00000489142 SCN3AQ9NY46 2000 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 EFCAB8A8MWE9 144 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 H7BY64 318 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 AGPSO00116 658 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 SOCS6O14544 535 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 PIAS1O75925 651 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 CCNDBP1O95273 360 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 CD63P08962 238 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 PIM1P11309 404 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 FBLP22087 321 aaKnown RBP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 HSD17B2P37059 387 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 ARL4CP56559 192 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 C2orf54Q08AI8 447 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 PDIA2Q13087 525 aaKnown RBP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 PRTGQ2VWP7 1150 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 VWA2Q5GFL6 755 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 HECTD2Q5U5R9 776 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 PRAMEF13Q5VWM6 474 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 STEAP4Q687X5 459 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 UGT3A1Q6NUS8 523 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 MYO1HQ8N1T3 1032 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 RBMXL3Q8N7X1 1067 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms