RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 FAM114A2Q9NRY5 505 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 TAC3Q9UHF0 121 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 JRKLQ9Y4A0 524 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 SPTBN1Q01082 2364 aaKnown RBP23.42■■□□□ 1.34
LIME1-206ENST00000487026 ICE1Q9Y2F5 2266 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 KIF5CO60282 957 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 SYF2O95926 243 aaKnown RBP23.41■■□□□ 1.34
LIME1-206ENST00000487026 GLRBP48167 497 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 TUBB8Q3ZCM7 444 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 VWA2Q5GFL6 755 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 ARMC3Q5W041 872 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 Q6ZS92 163 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 PAQR7Q86WK9 346 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 OR11G2Q8NGC1 345 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 ZNF480Q8WV37 535 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 MIEF2Q96C03 454 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 CABS1Q96KC9 395 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 SEMA3GQ9NS98 782 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 C20orf96Q9NUD7 363 aaPredicted RBP23.41■■□□□ 1.34
LIME1-206ENST00000487026 MAD1L1Q9Y6D9 718 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 DOCK10Q96BY6 2186 aa23.41■■□□□ 1.34
LIME1-206ENST00000487026 FFAR3O14843 346 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 GPR42O15529 346 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 SLC16A8O95907 504 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 ZGLP1P0C6A0 271 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 SLC1A2P43004 574 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 OCA2Q04671 838 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 Q0VFX4 171 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 ARHGAP19Q14CB8 494 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 MUM1Q2TAK8 710 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 HKDC1Q2TB90 917 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 PRTGQ2VWP7 1150 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 ICE2Q659A1 982 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 PRMT9Q6P2P2 845 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 LAPTM4BQ86VI4 370 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 SSC4DQ8WTU2 575 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 SIGLEC10Q96LC7 697 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 YIPF2Q9BWQ6 316 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 CCDC68Q9H2F9 335 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 ZNF282Q9UDV7 671 aaPredicted RBP23.4■■□□□ 1.34
LIME1-206ENST00000487026 NTNG1Q9Y2I2 539 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 COPG1Q9Y678 874 aaKnown RBP23.4■■□□□ 1.34
LIME1-206ENST00000487026 NUP210LQ5VU65 1888 aa23.4■■□□□ 1.34
LIME1-206ENST00000487026 MDC1Q14676 2089 aaKnown RBP23.39■■□□□ 1.34
LIME1-206ENST00000487026 NRDCO43847 1150 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 HAUS5O94927 633 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 CBX6O95503 412 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 FBLP22087 321 aaKnown RBP23.39■■□□□ 1.33
LIME1-206ENST00000487026 MPP1Q00013 466 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 PRDX1Q06830 199 aaKnown RBP23.39■■□□□ 1.33
LIME1-206ENST00000487026 NAA25Q14CX7 972 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 CYP1B1Q16678 543 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 TTLL9Q3SXZ7 439 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 CRB2Q5IJ48 1285 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 AGAP7PQ5VUJ5 663 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 CYHR1Q6ZMK1 362 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 NEK10Q6ZWH5 1172 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 CSNK1A1LQ8N752 337 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 COG1Q8WTW3 980 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 ASB11Q8WXH4 323 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 C8orf44Q96CB5 159 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 THOC3Q96J01 351 aaKnown RBP23.39■■□□□ 1.33
LIME1-206ENST00000487026 AGAP4Q96P64 663 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 GPR21Q99679 349 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 C3orf18Q9UK00 162 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 RUVBL1Q9Y265 456 aaKnown RBP23.39■■□□□ 1.33
LIME1-206ENST00000487026 DHRS7Q9Y394 339 aa23.39■■□□□ 1.33
LIME1-206ENST00000487026 E7ENX8 843 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 VPS26AO75436 327 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 HSD17B2P37059 387 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 MAGEA3P43357 314 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 TAP2Q03519 686 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 LONRF1Q17RB8 773 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 IRAK1BP1Q5VVH5 260 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 PLD3Q8IV08 490 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 NAT8LQ8N9F0 302 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 DNAJB14Q8TBM8 379 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 LHPPQ9H008 270 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 PLEKHB1Q9UF11 243 aaPredicted RBP23.38■■□□□ 1.33
LIME1-206ENST00000487026 PCDHGA10Q9Y5H3 936 aa23.38■■□□□ 1.33
LIME1-206ENST00000487026 SMAPO00193 183 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 PGRMC1O00264 195 aaKnown RBP23.37■■□□□ 1.33
LIME1-206ENST00000487026 MPC1LP0DKB6 136 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 CARSP49589 748 aaKnown RBP23.37■■□□□ 1.33
LIME1-206ENST00000487026 C4orf17Q53FE4 359 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 HSP90AA5PQ58FG0 334 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 ZNF425Q6IV72 752 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 PIWIL4Q7Z3Z4 852 aaKnown RBP23.37■■□□□ 1.33
LIME1-206ENST00000487026 ADCK2Q7Z695 626 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 LRRC56Q8IYG6 542 aaPredicted RBP23.37■■□□□ 1.33
LIME1-206ENST00000487026 CPNE9Q8IYJ1 553 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 CD200R1Q8TD46 325 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 KCNJ9Q92806 393 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 OR2A5Q96R48 311 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 WDR77Q9BQA1 342 aaPredicted RBP23.37■■□□□ 1.33
LIME1-206ENST00000487026 ZNF160Q9HCG1 818 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 IARS2Q9NSE4 1012 aaKnown RBP23.37■■□□□ 1.33
LIME1-206ENST00000487026 CUEDC1Q9NWM3 386 aaPredicted RBP23.37■■□□□ 1.33
LIME1-206ENST00000487026 KLHL42Q9P2K6 505 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 TRPC4Q9UBN4 977 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms