RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 FMO3P31513 532 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 PSMD7P51665 324 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 CTSCP53634 463 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 ADARP55265 1226 aaKnown RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 CWF19L1Q69YN2 538 aaKnown RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 HTR3DQ70Z44 454 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 KRT73Q86Y46 540 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 TMEM145Q8NBT3 493 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 WFIKKN2Q8TEU8 576 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 JPH3Q8WXH2 748 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 TRMT2BQ96GJ1 504 aaKnown RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 MAGEB10Q96LZ2 347 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 PRAP1Q96NZ9 151 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 TRIT1Q9H3H1 467 aaKnown RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 FBXL12Q9NXK8 326 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 A0A1B0GTL3 188 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 EIF3MQ7L2H7 374 aaKnown RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 HEATR4Q86WZ0 1026 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 HIPK1Q86Z02 1210 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 SLC43A3Q8NBI5 491 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 FAIM2Q9BWQ8 316 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 CCM2LQ9NUG4 571 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 KLHL28Q9NXS3 571 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 SEC14L3Q9UDX4 400 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 A0A1W2PP55 124 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 A0A1W2PRB8 838 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 MYOGP15173 224 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 NFE2L1Q14494 772 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 UAP1L1Q3KQV9 507 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 GCNT6Q5T4J0 391 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 CLECL1Q8IZS7 167 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 MINDY1Q8N5J2 469 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 C10orf53Q8N6V4 93 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 CARS2Q9HA77 564 aaKnown RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 VAPAQ9P0L0 249 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 CXXC1Q9P0U4 656 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 DNMT3BQ9UBC3 853 aaKnown RBP12.84□□□□□ -0.35
HMGN1-216ENST00000486741 NDOR1Q9UHB4 597 aa12.84□□□□□ -0.35
HMGN1-216ENST00000486741 DDX6P26196 483 aaKnown RBP eCLIP12.83□□□□□ -0.361e-5■■■□□ 17.8
HMGN1-216ENST00000486741 DPP6P42658 865 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 RUNX1T1Q06455 604 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 ITGADQ13349 1161 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 TCEAL5Q5H9L2 206 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 ADGRG6Q86SQ4 1221 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 ZFAND4Q86XD8 727 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.36
HMGN1-216ENST00000486741 HERVK_113Q902F9 699 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 P2RY13Q9BPV8 354 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 TRMT61BQ9BVS5 477 aaKnown RBP12.83□□□□□ -0.36
HMGN1-216ENST00000486741 DDX28Q9NUL7 540 aaKnown RBP12.83□□□□□ -0.36
HMGN1-216ENST00000486741 UBAP1Q9NZ09 502 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 PSME2Q9UL46 239 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 KLHL20Q9Y2M5 609 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 EDDM13A0A1B0GTR0 161 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 M0QX08 132 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 LATS1O95835 1130 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 CTSKP43235 329 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 OR1E2P47887 323 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 HK3P52790 923 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 INHBCP55103 352 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 CDKL1Q00532 357 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 DCTN2Q13561 401 aaKnown RBP12.83□□□□□ -0.36
HMGN1-216ENST00000486741 OGFRL1Q5TC84 451 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-216ENST00000486741 AFMIDQ63HM1 303 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 ENPP6Q6UWR7 440 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 C16orf62Q7Z3J2 963 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 HMGN2P46Q86SG4 172 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 TICAM1Q8IUC6 712 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 LCN9Q8WX39 176 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 TEX37Q96LM6 180 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 SLC35A5Q9BS91 424 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 TUBB1Q9H4B7 451 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 RETREG1Q9H6L5 497 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 RWDD3Q9Y3V2 267 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 MAGED1Q9Y5V3 778 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-216ENST00000486741 E7EQ34 232 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 DBTP11182 482 aaKnown RBP12.83□□□□□ -0.36
HMGN1-216ENST00000486741 TNNI3P19429 210 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 PIGFQ07326 219 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 PERM1Q5SV97 790 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 TMIGD1Q6UXZ0 262 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 FUNDC1Q8IVP5 155 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 HHIPL1Q96JK4 782 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 TOX2Q96NM4 488 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 MUS81Q96NY9 551 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 CLDND1Q9NY35 253 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 SELENONQ9NZV5 590 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 RIMKLBQ9ULI2 386 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 DLGAP4Q9Y2H0 992 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 GPR45Q9Y5Y3 372 aa12.83□□□□□ -0.36
HMGN1-216ENST00000486741 IGLON5A6NGN9 336 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 E2F3O00716 465 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ZDHHC11BP0C7U3 371 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 CCNA2P20248 432 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 PPIBP23284 216 aaKnown RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 PDHA2P29803 388 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 IRS1P35568 1242 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 RPL3P39023 403 aaKnown RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ACTR1BP42025 376 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms