RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ZBED8Q8IZ13 594 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 OR2Y1Q8NGV0 311 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 PLCD4Q9BRC7 762 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 SOX17Q9H6I2 414 aaPredicted RBP16.88■□□□□ 0.29
COL6A1-204ENST00000486023 CUEDC1Q9NWM3 386 aaPredicted RBP16.88■□□□□ 0.29
COL6A1-204ENST00000486023 UTP6Q9NYH9 597 aaKnown RBP16.88■□□□□ 0.29
COL6A1-204ENST00000486023 ZFATQ9P243 1243 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 PDE10AQ9Y233 779 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 VWA7Q9Y334 891 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 IGKV1-8A0A0C4DH67 115 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 OR2A25A4D2G3 310 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 H7BY64 318 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 PIAS1O75925 651 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 WISP1O95388 367 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 CD63P08962 238 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 HIST1H2AGP0C0S8 130 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-204ENST00000486023 ERGP11308 486 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 HIST1H2ADP20671 130 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 ITGAXP20702 1163 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 IMPA1P29218 277 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 RRADP55042 308 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 CALCOCO2Q13137 446 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 NAA25Q14CX7 972 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 IGFBP7Q16270 282 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 MRPL14Q6P1L8 145 aaKnown RBP16.87■□□□□ 0.29
COL6A1-204ENST00000486023 RNF44Q7L0R7 432 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 OVCH1Q7RTY7 1134 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 MAATS1Q7Z4T9 603 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 STRA8Q7Z7C7 330 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 MRGPREQ86SM8 312 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 FBXO15Q8NCQ5 510 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-204ENST00000486023 FDCSPQ8NFU4 85 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 RERGQ96A58 199 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-204ENST00000486023 LRRC39Q96DD0 335 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 HIST1H2AHQ96KK5 128 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 CCDC138Q96M89 665 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 PRAP1Q96NZ9 151 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 HIST1H2AJQ99878 128 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 H2AFJQ9BTM1 129 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 CCDC177Q9NQR7 707 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-204ENST00000486023 CDC23Q9UJX2 597 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 ANAPC2Q9UJX6 822 aa16.87■□□□□ 0.29
COL6A1-204ENST00000486023 G3BP2Q9UN86 482 aaKnown RBP16.87■□□□□ 0.29
COL6A1-204ENST00000486023 RAD51CO43502 376 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 MED26O95402 600 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 C8GP07360 202 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 IL2P60568 153 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 TBPL1P62380 186 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 ETF1P62495 437 aaKnown RBP16.86■□□□□ 0.29
COL6A1-204ENST00000486023 MGAT5Q09328 741 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 NAE1Q13564 534 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 HKDC1Q2TB90 917 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 YOD1Q5VVQ6 348 aaPredicted RBP16.86■□□□□ 0.29
COL6A1-204ENST00000486023 LRRC8EQ6NSJ5 796 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 AGTRAPQ6RW13 159 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 MED25Q71SY5 747 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 PAQR7Q86WK9 346 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 CSNK1A1LQ8N752 337 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 TMEM102Q8N9M5 508 aaPredicted RBP16.86■□□□□ 0.29
COL6A1-204ENST00000486023 BBOF1Q8ND07 529 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 PYROXD1Q8WU10 500 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 ZNF285Q96NJ3 590 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 OLFM1Q99784 485 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 ERP44Q9BS26 406 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 MFRPQ9BY79 579 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 PARVBQ9HBI1 364 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 ZNF304Q9HCX3 659 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 SAYSD1Q9NPB0 183 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 CTSFQ9UBX1 484 aa16.86■□□□□ 0.29
COL6A1-204ENST00000486023 FITM1A5D6W6 292 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 FAM187AA6NFU0 413 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 EIF3FO00303 357 aaPredicted RBP16.85■□□□□ 0.29
COL6A1-204ENST00000486023 FFAR3O14843 346 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 HAT1O14929 419 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 TP73O15350 636 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 GPR42O15529 346 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 GUCA1CO95843 209 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 UMODP07911 640 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 CASRP41180 1078 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 GCGRP47871 477 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 MLLT10P55197 1068 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 ABATP80404 500 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 NKG7Q16617 165 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 PHKG1Q16816 387 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 MUM1Q2TAK8 710 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 PRAMEF13Q5VWM6 474 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 STEAP4Q687X5 459 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 FAM45BPQ6NSW5 357 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 COX15Q7KZN9 410 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 LRRC56Q8IYG6 542 aaPredicted RBP16.85■□□□□ 0.29
COL6A1-204ENST00000486023 CLEC1AQ8NC01 280 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 FAM45AQ8TCE6 357 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 FER1L6-AS2Q96M78 137 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 NUDT9Q9BW91 350 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 SYNPO2LQ9H987 977 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 P4HTMQ9NXG6 502 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 ARL15Q9NXU5 204 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 ANKMY1Q9P2S6 941 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 KLK4Q9Y5K2 254 aa16.85■□□□□ 0.29
COL6A1-204ENST00000486023 PSAT1Q9Y617 370 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms