RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PAGE2BQ5JRK9 111 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 YOD1Q5VVQ6 348 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-208ENST00000485618 ICE2Q659A1 982 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 FIGLAQ6QHK4 219 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 LCTLQ6UWM7 567 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 HDXQ7Z353 690 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 TAX1BP1Q86VP1 789 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 SPATA6LQ8N4H0 392 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 LINC01555Q8NAE3 123 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 PDPRQ8NCN5 879 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 OR2L3Q8NG85 312 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 OR2A1Q8NGT9 310 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 OR56A3Q8NH54 315 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 KCTD4Q8WVF5 259 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 FGF11Q92914 225 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 UBE2E3Q969T4 207 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 MAGEB10Q96LZ2 347 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-208ENST00000485618 OR6C1Q96RD1 312 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 C17orf62Q9BQA9 187 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 AIF1LQ9BQI0 150 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 DPH7Q9BTV6 452 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 MENTQ9BUN1 341 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 ACAT2Q9BWD1 397 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 SGPP1Q9BX95 441 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 ATG10Q9H0Y0 220 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 EPB41L4BQ9H329 900 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 CENPHQ9H3R5 247 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 RRAGDQ9NQL2 400 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-208ENST00000485618 FGF21Q9NSA1 209 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 ABCF3Q9NUQ8 709 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 SPHK1Q9NYA1 384 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 GPRC5BQ9NZH0 403 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 TMEM9Q9P0T7 183 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 CIDEBQ9UHD4 219 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 TAC3Q9UHF0 121 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 KLK4Q9Y5K2 254 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 ACACAQ13085 2346 aa7.96□□□□□ -1.14
SF3A1-208ENST00000485618 PCM1Q15154 2024 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 NCF1BA6NI72 391 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 NCF1CA8MVU1 366 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 E7EQ34 232 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 STMND1H3BQB6 276 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 ATXN7O15265 892 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 TLX3O43711 291 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PRICKLE3O43900 615 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 OR2B3O76000 313 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 WDR47O94967 919 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 KLK3P07288 261 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PIM1P11309 404 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 FGF3P11487 239 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 NCF1P14598 390 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 EZRP15311 586 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 ST6GAL1P15907 406 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 EPB42P16452 691 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 NPPBP16860 134 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 KRT4P19013 534 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 GSTM2P28161 218 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 CRHR1P34998 444 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 EIF2S3P41091 472 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 GRIA3P42263 894 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 GLRBP48167 497 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 ATP1A2P50993 1020 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 ARSFP54793 590 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 ITGA1P56199 1179 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 RPS15AP62244 130 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 TBPL1P62380 186 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SKP1P63208 163 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 FASTKQ14296 549 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 GRM7Q14831 915 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 OR4D1Q15615 310 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PDK4Q16654 411 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PPP1R3AQ16821 1122 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PTCHD3Q3KNS1 767 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 MANEAQ5SRI9 462 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 NIPAL1Q6NVV3 410 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SUSD1Q6UWL2 747 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 LRRC70Q7Z2Q7 622 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 TMPRSS9Q7Z410 1059 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 THOC6Q86W42 341 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SLC22A9Q8IVM8 553 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 MCATQ8IVS2 390 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 IQCKQ8N0W5 287 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 KRT78Q8N1N4 520 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SNX31Q8N9S9 440 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 CCDC63Q8NA47 563 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 TTLQ8NG68 377 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 RDH11Q8TC12 318 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 EPS8L3Q8TE67 593 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PPP4R1Q8TF05 950 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SLC5A11Q8WWX8 675 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SLC39A7Q92504 469 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 DLG3Q92796 817 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 USP7Q93009 1102 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 EXT2Q93063 718 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 RHBDF1Q96CC6 855 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SEC16BQ96JE7 1060 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 DPH2Q9BQC3 489 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SELENOSQ9BQE4 189 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PLCD4Q9BRC7 762 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 NDC1Q9BTX1 674 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms