RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ALDOAP04075 364 aaKnown RBP15.23■□□□□ 0.03
UPF3A-208ENST00000484246 ANXA5P08758 320 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 LIFP15018 202 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 EMP3P54852 163 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 YBX1P67809 324 aaKnown RBP15.23■□□□□ 0.03
UPF3A-208ENST00000484246 GPS2Q13227 327 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 NAE1Q13564 534 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 BMPR2Q13873 1038 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 TGFBIQ15582 683 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 MROH9Q5TGP6 573 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 TBC1D1Q86TI0 1168 aaPredicted RBP15.23■□□□□ 0.03
UPF3A-208ENST00000484246 VASH2Q86V25 355 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 DSELQ8IZU8 1212 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 TCAIMQ8N3R3 496 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 SLC38A9Q8NBW4 561 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 PDPRQ8NCN5 879 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 ABHD11Q8NFV4 315 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 DCAKDQ8WVC6 231 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 KIAA1143Q96AT1 154 aaPredicted RBP15.23■□□□□ 0.03
UPF3A-208ENST00000484246 PTERQ96BW5 349 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 SLC45A3Q96JT2 553 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 SELENOSQ9BQE4 189 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 SNX15Q9NRS6 342 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 IGSF5Q9NSI5 407 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 SNX7Q9UNH6 387 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 PCDHGA4Q9Y5G9 962 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 LOC101059948A0A1B0GTJ6 334 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 TEX51A0A1B0GUA7 166 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 EXOC1LA0A1B0GW35 172 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 MEN1O00255 615 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 ZNF749O43361 778 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 NRP2O60462 931 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 KRT38O76015 456 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 IPO13O94829 963 aaKnown RBP15.22■□□□□ 0.03
UPF3A-208ENST00000484246 NTRK1P04629 796 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 C2P06681 752 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 LTA4HP09960 611 aaKnown RBP15.22■□□□□ 0.03
UPF3A-208ENST00000484246 CCNYL3P0C7X3 344 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 WT1P19544 449 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-208ENST00000484246 GGT5P36269 586 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 MSH2P43246 934 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 SLC6A12P48065 614 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 SRSF6Q13247 344 aaKnown RBP15.22■□□□□ 0.03
UPF3A-208ENST00000484246 CSHL1Q14406 222 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 TAF1BQ53T94 588 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-208ENST00000484246 THEMIS2Q5TEJ8 643 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 PRAMEF17Q5VTA0 474 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 CCDC81Q6ZN84 652 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 RAPH1Q70E73 1250 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 C17orf64Q86WR6 236 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 GSPT2Q8IYD1 628 aaKnown RBP15.22■□□□□ 0.03
UPF3A-208ENST00000484246 CENPLQ8N0S6 344 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-208ENST00000484246 RHBDF1Q96CC6 855 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 OR4K3Q96R72 315 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 SARGQ9BW04 601 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 ATG10Q9H0Y0 220 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 GPN2Q9H9Y4 310 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-208ENST00000484246 NMRAL1Q9HBL8 299 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 TMEM184CQ9NVA4 438 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 ACOT9Q9Y305 439 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 IKBKGQ9Y6K9 419 aa15.22■□□□□ 0.03
UPF3A-208ENST00000484246 A0A096LPK6 155 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 KERAO60938 352 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 GUCA1CO95843 209 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 ONECUT2O95948 504 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 RECKO95980 971 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 KLK3P07288 261 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-208ENST00000484246 CTSBP07858 339 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 NPPBP16860 134 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 GCAP28676 217 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 ARSFP54793 590 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 DLG1Q12959 904 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 TSTA3Q13630 321 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-208ENST00000484246 GRM7Q14831 915 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 OR4D1Q15615 310 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 UAP1Q16222 522 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-208ENST00000484246 PRTGQ2VWP7 1150 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 PTCHD3Q3KNS1 767 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 WDR93Q6P2C0 686 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 FBXO42Q6P3S6 717 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 FRA10AC1Q70Z53 315 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 ISCA2Q86U28 154 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 GPSM1Q86YR5 675 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 RHEBL1Q8TAI7 183 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 STAG3L4Q8TBR4 150 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 THAP11Q96EK4 314 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 MED8Q96G25 268 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 GBP5Q96PP8 586 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 OR2A5Q96R48 311 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 ATOH8Q96SQ7 321 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 GPR87Q9BY21 358 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 SPRTNQ9H040 489 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-208ENST00000484246 CPNE5Q9HCH3 593 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 CUEDC1Q9NWM3 386 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-208ENST00000484246 KCND3Q9UK17 655 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 CROTQ9UKG9 612 aa15.21■□□□□ 0.03
UPF3A-208ENST00000484246 KCNE1BA0A087WTH5 132 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 RAB40ALP0C0E4 278 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 TFEBP19484 476 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 TYK2P29597 1187 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms