RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 RBMXL3Q8N7X1 1067 aaKnown RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 Q8NA96 180 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 SLC38A9Q8NBW4 561 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 CLEC1AQ8NC01 280 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 OR4E2Q8NGC2 313 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 HEXDCQ8WVB3 486 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 LCN9Q8WX39 176 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 TM9SF4Q92544 642 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 P3H4Q92791 437 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 DLG3Q92796 817 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 RELTQ969Z4 430 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 ULK4Q96C45 1275 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 CCDC120Q96HB5 630 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 LINC00615Q96LM1 132 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 C5orf34Q96MH7 638 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 FCRL5Q96RD9 977 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 PLCD4Q9BRC7 762 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 NUDT9Q9BW91 350 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 ASB8Q9H765 288 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 VPS37BQ9H9H4 285 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 PCMTD2Q9NV79 361 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 C5AR2Q9P296 337 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 RSPH14Q9UHP6 348 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 CRLS1Q9UJA2 301 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 B3GNT3Q9Y2A9 372 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 USP9YO00507 2555 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 FLNCQ14315 2725 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 C17orf113A0A1B0GUU1 675 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 C5orf60A6NFR6 353 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 C2orf74A8MZ97 194 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 HACD1B0YJ81 288 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 F5H423 210 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 GAPDHSO14556 408 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ZNF749O43361 778 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 LDB2O43679 373 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ANXA9O76027 345 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 MED26O95402 600 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 LCA5LO95447 670 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 LDLRP01130 860 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 TPM1P09493 284 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 RNF224P0DH78 156 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 GLI4P10075 376 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ST6GAL1P15907 406 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PECAM1P16284 738 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PRKCAP17252 672 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ITGALP20701 1170 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 FUT4P22083 530 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PRDX3P30048 256 aaKnown RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 OTX2P32243 289 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 FOLR3P41439 243 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 CDKN2BP42772 138 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 LMAN1P49257 510 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PRLHRP49683 370 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 GEMP55040 296 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 KLF1Q13351 362 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PIN1Q13526 163 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 RAPSNQ13702 412 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ATP1A4Q13733 1029 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 TRIM14Q14142 442 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PRPSAP1Q14558 356 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 SSPNQ14714 243 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 MYBPC3Q14896 1274 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 TAF1AQ15573 450 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PTCHD3Q3KNS1 767 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 TFDP3Q5H9I0 405 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 MLIPQ5VWP3 458 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 STEAP3Q658P3 488 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ITPRIPL1Q6GPH6 555 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 LCN10Q6JVE6 187 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 SARM1Q6SZW1 724 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 FAM198BQ6UWH4 519 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 MFSD7Q6UXD7 560 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 MRGPREQ86SM8 312 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ZC3H18Q86VM9 953 aaKnown RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 AMIGO1Q86WK6 493 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ZNF567Q8N184 647 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ZADH2Q8N4Q0 377 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ZNF610Q8N9Z0 462 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 NUP43Q8NFH3 380 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 OR4K2Q8NGD2 314 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 OR8K1Q8NGG5 319 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 OR1L3Q8NH93 324 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PROKR1Q8TCW9 393 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 LRRC45Q96CN5 670 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 SNRNP40Q96DI7 357 aaKnown RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 OXNAD1Q96HP4 312 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 RBM41Q96IZ5 413 aaKnown RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 RMDN2Q96LZ7 410 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 CCDC42Q96M95 316 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PPM1MQ96MI6 270 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 TRAPPC9Q96Q05 1148 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 COPS8Q99627 209 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 PITPNM3Q9BZ71 974 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ILKAPQ9H0C8 392 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-207ENST00000483407 MVB12BQ9H7P6 319 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ASF1BQ9NVP2 202 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 IRAK4Q9NWZ3 460 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 ZIM2Q9NZV7 527 aa5.67□□□□□ -1.5
CSDE1-207ENST00000483407 IFNKQ9P0W0 207 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms