RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 JMJD6Q6NYC1 403 aaPredicted RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 UBE2R2Q712K3 238 aaPredicted RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 DENND6AQ8IWF6 608 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 C2orf73Q8N5S3 287 aaPredicted RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 CSNK1A1LQ8N752 337 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 CD200R1Q8TD46 325 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 CERS2Q96G23 380 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 AGAP4Q96P64 663 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 SPSB2Q99619 263 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 NAPGQ99747 312 aaPredicted RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 HAUS8Q9BT25 410 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 NUDT9Q9BW91 350 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 DRC3Q9H069 523 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 ILKAPQ9H0C8 392 aaPredicted RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 EPS8L2Q9H6S3 715 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 PARVBQ9HBI1 364 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 MKKSQ9NPJ1 570 aaPredicted RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 PPANQ9NQ55 473 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 FBXO6Q9NRD1 293 aaPredicted RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 ZC3H7BQ9UGR2 993 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 TAC3Q9UHF0 121 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 IGLV3-12A0A075B6K2 115 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 A0A0J9YVX5 310 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 VSTM2BA6NLU5 285 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 E7ENX8 843 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 MAP2K7O14733 419 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 HCRTR1O43613 425 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 CTSVO60911 334 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 HPP00738 406 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 EIF2S1P05198 315 aaKnown RBP10.93□□□□□ -0.66
CCM2-213ENST00000480658 ICAM2P13598 275 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 ACPPP15309 386 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 ARL4CP56559 192 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 IL2P60568 153 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 TAP2Q03519 686 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
CCM2-213ENST00000480658 TSTA3Q13630 321 aaPredicted RBP10.93□□□□□ -0.66
CCM2-213ENST00000480658 B3GNTL1Q67FW5 361 aaPredicted RBP10.93□□□□□ -0.66
CCM2-213ENST00000480658 FAM45BPQ6NSW5 357 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 PPP1R32Q7Z5V6 425 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 ADCK2Q7Z695 626 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 PAQR7Q86WK9 346 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 FAM45AQ8TCE6 357 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 PPP4R1Q8TF05 950 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 ZNF480Q8WV37 535 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 ANKRD7Q92527 254 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 FAM136AQ96C01 138 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 SNF8Q96H20 258 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 PKP4Q99569 1192 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 GPR21Q99679 349 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 NRTNQ99748 197 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 CRB3Q9BUF7 120 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 ACAT2Q9BWD1 397 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 TGIF2Q9GZN2 237 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 LHPPQ9H008 270 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 DDX47Q9H0S4 455 aaKnown RBP10.93□□□□□ -0.66
CCM2-213ENST00000480658 AGPAT4Q9NRZ5 378 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 IARS2Q9NSE4 1012 aaKnown RBP10.93□□□□□ -0.66
CCM2-213ENST00000480658 TMEM184CQ9NVA4 438 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 CUEDC1Q9NWM3 386 aaPredicted RBP10.93□□□□□ -0.66
CCM2-213ENST00000480658 CIDEBQ9UHD4 219 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 RUVBL2Q9Y230 463 aaKnown RBP10.93□□□□□ -0.66
CCM2-213ENST00000480658 MAP4K5Q9Y4K4 846 aa10.93□□□□□ -0.66
CCM2-213ENST00000480658 KCNE1BA0A087WTH5 132 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 A0A1W2PQ72 361 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 A6NL46 340 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 H0YGG7 62 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 H0YIG0 161 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 UMODP07911 640 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 ZGLP1P0C6A0 271 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 SLC35G6P0C7Q6 338 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 NR1D1P20393 614 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 IL10P22301 178 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 PSMB5P28074 263 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 ARF3P61204 181 aaPredicted RBP10.92□□□□□ -0.66
CCM2-213ENST00000480658 GNG11P61952 73 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 DHX9Q08211 1270 aaKnown RBP10.92□□□□□ -0.66
CCM2-213ENST00000480658 SLC9A5Q14940 896 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 PRTGQ2VWP7 1150 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 CCSMST1Q4G0I0 132 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 FHL5Q5TD97 284 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 SLC6A19Q695T7 634 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 ZNF425Q6IV72 752 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 CAPN13Q6MZZ7 669 aaPredicted RBP10.92□□□□□ -0.66
CCM2-213ENST00000480658 RIPOR1Q6ZS17 1223 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 MICALCLQ6ZW33 695 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 SLC26A11Q86WA9 606 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 C17orf64Q86WR6 236 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 CPNE9Q8IYJ1 553 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 CAMKVQ8NCB2 501 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 VPS39Q96JC1 886 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 ZFATQ9P243 1243 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 C19orf25Q9UFG5 118 aaPredicted RBP10.92□□□□□ -0.66
CCM2-213ENST00000480658 FBXL4Q9UKA2 621 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 KLHL20Q9Y2M5 609 aa10.92□□□□□ -0.66
CCM2-213ENST00000480658 HAUS5O94927 633 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 PDGFAP04085 211 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 IMPA1P29218 277 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 HPDP32754 393 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms