RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 RNF44Q7L0R7 432 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 TMEM151BQ8IW70 566 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 METTL27Q8N6F8 245 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 MCUQ8NE86 351 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 OR9A1PQ8NGU1 263 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 NACC2Q96BF6 587 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 SERPINB12Q96P63 405 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 SPSB2Q99619 263 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 TRIM51Q9BSJ1 452 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 ACAT2Q9BWD1 397 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 SLC26A1Q9H2B4 701 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 CCDC68Q9H2F9 335 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 ATP13A2Q9NQ11 1180 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 GALPQ9UBC7 116 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 FBXL4Q9UKA2 621 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 USP9XQ93008 2570 aaPredicted RBP13.71□□□□□ -0.22
ATG4B-218ENST00000479554 NUP210LQ5VU65 1888 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 ESYT3A0FGR9 886 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 MAGEB16A2A368 324 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 HYKKA2RU49 373 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 SDR42E2A6NKP2 422 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 MYO1CO00159 1063 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 MASP2O00187 686 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 NRP2O60462 931 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 PSIP1O75475 530 aaKnown RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 EIF2S1P05198 315 aaKnown RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 ERVK-10P10266 1014 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 ERGP11308 486 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 VARSP26640 1264 aaKnown RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 RPA3P35244 121 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 OR1D4P47884 311 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 AIMP2Q13155 320 aaKnown RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 TSTA3Q13630 321 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 PPP1R7Q15435 360 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 DUPD1Q68J44 220 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 SUSD1Q6UWL2 747 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 GSPT2Q8IYD1 628 aaKnown RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 SMPDL3AQ92484 453 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 TM9SF4Q92544 642 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 CAVIN3Q969G5 261 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 COL26A1Q96A83 441 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 ZFYVE21Q9BQ24 234 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 DPH7Q9BTV6 452 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 SLC29A3Q9BZD2 475 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 SOX17Q9H6I2 414 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 ZNF552Q9H707 407 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 SLC6A20Q9NP91 592 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 FBXO6Q9NRD1 293 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 CTSFQ9UBX1 484 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 ZC3H7BQ9UGR2 993 aaKnown RBP13.7□□□□□ -0.22
ATG4B-218ENST00000479554 NFU1Q9UMS0 254 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 MAU2Q9Y6X3 613 aa13.7□□□□□ -0.22
ATG4B-218ENST00000479554 PCM1Q15154 2024 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 CCDC88CQ9P219 2028 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 OR2A25A4D2G3 310 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 ZNF839A8K0R7 811 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 VPS26AO75436 327 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 ITGA3P26006 1051 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 SLC1A2P43004 574 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 CLCN7P51798 805 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 SOX8P57073 446 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 PTK6Q13882 451 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 ARHGAP19Q14CB8 494 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 RBBP7Q16576 425 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 FHL5Q5TD97 284 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 PRMT9Q6P2P2 845 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 SHISA6Q6ZSJ9 500 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 NEK10Q6ZWH5 1172 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 DENND6AQ8IWF6 608 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 IQCKQ8N0W5 287 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 DTWD1Q8N5C7 304 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 SLC30A3Q99726 388 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 FUT8Q9BYC5 575 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 ILKAPQ9H0C8 392 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-218ENST00000479554 DPH5Q9H2P9 285 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 ZNF304Q9HCX3 659 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 MRPS30Q9NP92 439 aaKnown RBP13.69□□□□□ -0.22
ATG4B-218ENST00000479554 B3GNT3Q9Y2A9 372 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 HS3ST3B1Q9Y662 390 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 MAD1L1Q9Y6D9 718 aa13.69□□□□□ -0.22
ATG4B-218ENST00000479554 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-218ENST00000479554 LOC105369274A0A096LPK9 316 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 LOC102723532A0A0G2JNH3 316 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 ZCWPW2A0A1B0GU75 182 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 BLACEA4D250 179 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 SOCS6O14544 535 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 MAP2K7O14733 419 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 ALOX12BO75342 701 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 AGFG2O95081 481 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 CCNDBP1O95273 360 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 MED26O95402 600 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 F7P08709 466 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-218ENST00000479554 HSD17B2P37059 387 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 PNLIPRP1P54315 467 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 YBX1P67809 324 aaKnown RBP13.68□□□□□ -0.22
ATG4B-218ENST00000479554 CTBP1Q13363 440 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 CASP8Q14790 479 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 LONRF1Q17RB8 773 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms