RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 NPPBP16860 134 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 TNFRSF8P28908 595 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 DLSTP36957 453 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 STAT5AP42229 794 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 GDF5P43026 501 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 GCGRP47871 477 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ATP1A2P50993 1020 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 AP1S2P56377 157 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 TMPRSS3P57727 454 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 SNRPNP63162 240 aaKnown RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CYP4F2P78329 520 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ABHD18Q0P651 414 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 MAP7Q14244 749 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 SLC29A2Q14542 456 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 PTCHD3Q3KNS1 767 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 BROXQ5VW32 411 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 PRAMEF13Q5VWM6 474 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ZNF385CQ66K41 422 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CYB5D1Q6P9G0 228 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 INO80CQ6PI98 192 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CCDC81Q6ZN84 652 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 RAPH1Q70E73 1250 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 RNF44Q7L0R7 432 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 TRMT10CQ7L0Y3 403 aaKnown RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CENPLQ8N0S6 344 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ESX1Q8N693 406 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CT55Q8WUE5 264 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 DCAKDQ8WVC6 231 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 KCTD4Q8WVF5 259 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 N4BP2L2Q92802 583 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 FBXL8Q96CD0 374 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 NXNL1Q96CM4 212 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CLIP3Q96DZ5 547 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 PRAP1Q96NZ9 151 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 DHRS4Q9BTZ2 278 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 SGPP1Q9BX95 441 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ACTR5Q9H9F9 607 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CCDC177Q9NQR7 707 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 SNX15Q9NRS6 342 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CROTQ9UKG9 612 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 OARD1Q9Y530 152 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 A0A096LPK6 155 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 H0YGG7 62 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 MEN1O00255 615 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 HAT1O14929 419 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 TAPBPO15533 448 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ZSCAN9O15535 394 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 STATHP02808 62 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 INHBAP08476 426 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ABHD2P08910 425 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 CDH1P12830 882 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 TCN2P20062 427 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 CRABP2P29373 138 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 MSH2P43246 934 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 MAGEA12P43365 314 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 VSX2P58304 361 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ARF3P61204 181 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 RPS18P62269 152 aaKnown RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 VSNL1P62760 191 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 CDKL1Q00532 357 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 NFKB2Q00653 900 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 MEF2AQ02078 507 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 VAC14Q08AM6 782 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ILF2Q12905 390 aaKnown RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 TERF2Q15554 542 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 TGFBIQ15582 683 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ZC3H12BQ5HYM0 836 aaKnown RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 CATSPEREQ5SY80 951 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ATP1A1-AS1Q5TC04 95 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 C1orf189Q5VU69 101 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 FAM69BQ5VUD6 431 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 CAPN13Q6MZZ7 669 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 LCTLQ6UWM7 567 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ZNF517Q6ZMY9 492 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ADCK2Q7Z695 626 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ADAMTSL2Q86TH1 951 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ISCA2Q86U28 154 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 TMEM151BQ8IW70 566 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 GPR135Q8IZ08 494 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 DSELQ8IZU8 1212 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 PLD6Q8N2A8 252 aaKnown RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 GOLGA6L1Q8N7Z2 621 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 EIF1ADQ8N9N8 165 aaKnown RBP9.28□□□□□ -0.92
HDAC3-208ENST00000476739 EXT2Q93063 718 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 KIAA1191Q96A73 305 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ESAMQ96AP7 390 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 RHBDF1Q96CC6 855 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 LRFN5Q96NI6 719 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ZNF285Q96NJ3 590 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 GPR78Q96P69 363 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 OR2A5Q96R48 311 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 EGFL8Q99944 293 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 SELENOSQ9BQE4 189 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 TMEM79Q9BSE2 394 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 TRIM54Q9BYV2 358 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 CHST8Q9H2A9 424 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 SPNS1Q9H2V7 528 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 ALG9Q9H6U8 611 aa9.28□□□□□ -0.92
HDAC3-208ENST00000476739 GPN2Q9H9Y4 310 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms