RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 PRTGQ2VWP7 1150 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 TUBB8Q3ZCM7 444 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 PRR30Q53SZ7 412 aaPredicted RBP19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 ICE2Q659A1 982 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 SUSD1Q6UWL2 747 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 KIRREL2Q6UWL6 708 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 DENND6AQ8IWF6 608 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 PPIL6Q8IXY8 311 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 OR4N4Q8N0Y3 316 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 GABPB2Q8TAK5 448 aaPredicted RBP19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 ACTRT1Q8TDG2 376 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 COG1Q8WTW3 980 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 ASB11Q8WXH4 323 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 MVB12AQ96EY5 273 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 CABS1Q96KC9 395 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 FAM167BQ9BTA0 163 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 CRB3Q9BUF7 120 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 FBXO6Q9NRD1 293 aaPredicted RBP19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 DHRS7Q9Y394 339 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 CNTRLQ7Z7A1 2325 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 BLACEA4D250 179 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 CYSRT1A8MQ03 144 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 TCP11X1B4DZS4 312 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 EIF3FO00303 357 aaPredicted RBP19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 TXNDC9O14530 226 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 ZBTB14O43829 449 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 SLC16A8O95907 504 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 EZRP15311 586 aaKnown RBP19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 FBLP22087 321 aaKnown RBP19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 SLC1A2P43004 574 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 AGAP7PQ5VUJ5 663 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 GARNL3Q5VVW2 1013 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 SHISA6Q6ZSJ9 500 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 PAQR7Q86WK9 346 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 CSNK1A1LQ8N752 337 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 NAT8LQ8N9F0 302 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 STT3BQ8TCJ2 826 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 RERGQ96A58 199 aaPredicted RBP19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 MIEF2Q96C03 454 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 AGAP4Q96P64 663 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 EBNA1BP2Q99848 306 aaKnown RBP19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 CUEDC1Q9NWM3 386 aaPredicted RBP19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 TAC3Q9UHF0 121 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 FBXO5Q9UKT4 447 aa19.42■□□□□ 0.7
PDLIM4-206ENST00000474421 GFYI3L273 518 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 CES2O00748 559 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 NRP2O60462 931 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 SYF2O95926 243 aaKnown RBP19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 ZGLP1P0C6A0 271 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 YBX1P67809 324 aaKnown RBP19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 PTK6Q13882 451 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 PPP1R7Q15435 360 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 ZNF425Q6IV72 752 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 LRRC8EQ6NSJ5 796 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 ZNF549Q6P9A3 640 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 Q6ZS92 163 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 TMEM151BQ8IW70 566 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 GIMAP7Q8NHV1 300 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 ZNF480Q8WV37 535 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 SNRNP40Q96DI7 357 aaKnown RBP19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 SIGLEC10Q96LC7 697 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 C10orf90Q96M02 699 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 OSBPL9Q96SU4 736 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 SLC30A3Q99726 388 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 WDR77Q9BQA1 342 aaPredicted RBP19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 LHPPQ9H008 270 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 MED16Q9Y2X0 877 aa19.41■□□□□ 0.7
PDLIM4-206ENST00000474421 IGLV3-12A0A075B6K2 115 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 E7ENX8 843 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 MASP2O00187 686 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 SMAPO00193 183 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 ZSCAN12O43309 604 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 MED26O95402 600 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 SKIV2L2P42285 1042 aaKnown RBP19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 TAP2Q03519 686 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 KLC1Q07866 573 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 CUL1Q13616 776 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 DSG2Q14126 1118 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 UGT3A1Q6NUS8 523 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 CISD2Q8N5K1 135 aaKnown RBP19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 OR11G2Q8NGC1 345 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 PPP4R1Q8TF05 950 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 GPR21Q99679 349 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 C3orf18Q9UK00 162 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 ICE1Q9Y2F5 2266 aa19.4■□□□□ 0.7
PDLIM4-206ENST00000474421 HIVEP3Q5T1R4 2406 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 IGKV1-8A0A0C4DH67 115 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 MAP2K7O14733 419 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 PCDH17O14917 1159 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 TTC4O95801 387 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 HPP00738 406 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 ANXA5P08758 320 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 ACPPP15309 386 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 PGAM1P18669 254 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 HRH2P25021 359 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 HSP90AA5PQ58FG0 334 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 THEMIS2Q5TEJ8 643 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 IGFL2Q6UWQ7 119 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 CYHR1Q6ZMK1 362 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms