RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 NR6A1Q15406 480 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 CYP1B1Q16678 543 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 ZNF549Q6P9A3 640 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 Q6ZS92 163 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 PARP9Q8IXQ6 854 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 OR11G2Q8NGC1 345 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 GIMAP7Q8NHV1 300 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 PRR7Q8TB68 274 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 STT3BQ8TCJ2 826 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 SSC4DQ8WTU2 575 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 INPP5DQ92835 1189 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 MIEF2Q96C03 454 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 CABS1Q96KC9 395 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 C10orf90Q96M02 699 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 NAP1L3Q99457 506 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-213ENST00000471978 CRB3Q9BUF7 120 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 KLHL42Q9P2K6 505 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 NEU2Q9Y3R4 380 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 IGKV1-8A0A0C4DH67 115 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 KIF5CO60282 957 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 SLC16A8O95907 504 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 ZGLP1P0C6A0 271 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 CARSP49589 748 aaKnown RBP21.49■■□□□ 1.03
C9orf3-213ENST00000471978 PRDX1Q06830 199 aaKnown RBP21.49■■□□□ 1.03
C9orf3-213ENST00000471978 LONRF1Q17RB8 773 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 PRTGQ2VWP7 1150 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 AGAP7PQ5VUJ5 663 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 ICE2Q659A1 982 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 CUZD1Q86UP6 607 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 PAQR7Q86WK9 346 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 PRSS58Q8IYP2 241 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 PPFIBP2Q8ND30 876 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 ZNF480Q8WV37 535 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 KCNJ9Q92806 393 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 AGAP4Q96P64 663 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 C20orf96Q9NUD7 363 aaPredicted RBP21.49■■□□□ 1.03
C9orf3-213ENST00000471978 UTP6Q9NYH9 597 aaKnown RBP21.49■■□□□ 1.03
C9orf3-213ENST00000471978 MED16Q9Y2X0 877 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 MAD1L1Q9Y6D9 718 aa21.49■■□□□ 1.03
C9orf3-213ENST00000471978 NBPF19A0A087WUL8 3843 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 PGRMC1O00264 195 aaKnown RBP21.48■■□□□ 1.03
C9orf3-213ENST00000471978 CCNDBP1O95273 360 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 SYF2O95926 243 aaKnown RBP21.48■■□□□ 1.03
C9orf3-213ENST00000471978 FBLP22087 321 aaKnown RBP21.48■■□□□ 1.03
C9orf3-213ENST00000471978 SLC1A2P43004 574 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 MAGEA3P43357 314 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 GLRBP48167 497 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 EMP3P54852 163 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 HIF1AQ16665 826 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 SPNS2Q8IVW8 549 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 AGGF1Q8N302 714 aaeCLIP21.48■■□□□ 1.035e-11■■■■■ 61.5
C9orf3-213ENST00000471978 CSNK1A1LQ8N752 337 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 FBXO15Q8NCQ5 510 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-213ENST00000471978 ASB11Q8WXH4 323 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 WDR77Q9BQA1 342 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-213ENST00000471978 LHPPQ9H008 270 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 ABCF3Q9NUQ8 709 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 CUEDC1Q9NWM3 386 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-213ENST00000471978 C3orf18Q9UK00 162 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 RUVBL1Q9Y265 456 aaKnown RBP21.48■■□□□ 1.03
C9orf3-213ENST00000471978 DHRS7Q9Y394 339 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 PCDHGA10Q9Y5H3 936 aa21.48■■□□□ 1.03
C9orf3-213ENST00000471978 COPG1Q9Y678 874 aaKnown RBP21.48■■□□□ 1.03
C9orf3-213ENST00000471978 ICE1Q9Y2F5 2266 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 E7ENX8 843 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 CBX6O95503 412 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 MPC1LP0DKB6 136 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 ENO3P13929 434 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-213ENST00000471978 ACPPP15309 386 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 TAP2Q03519 686 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 HKDC1Q2TB90 917 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 VWA2Q5GFL6 755 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 CRB2Q5IJ48 1285 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 ZNF425Q6IV72 752 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 LMNTD2Q8IXW0 634 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 NAT8LQ8N9F0 302 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 CALML6Q8TD86 181 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 RERGQ96A58 199 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-213ENST00000471978 THOC3Q96J01 351 aaKnown RBP21.47■■□□□ 1.03
C9orf3-213ENST00000471978 SIGLEC10Q96LC7 697 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 OR2A5Q96R48 311 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 GPR21Q99679 349 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 MESP1Q9BRJ9 268 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 YIPF2Q9BWQ6 316 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 SYNPO2LQ9H987 977 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 CDC14AQ9UNH5 594 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 CSAG2Q9Y5P2 127 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 COMMD10Q9Y6G5 202 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 TEX15Q9BXT5 2789 aa21.47■■□□□ 1.03
C9orf3-213ENST00000471978 DOCK10Q96BY6 2186 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 IGLV3-12A0A075B6K2 115 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 GFYI3L273 518 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 SMAPO00193 183 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 ZBTB14O43829 449 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 EZRP15311 586 aaKnown RBP21.46■■□□□ 1.03
C9orf3-213ENST00000471978 Q0VFX4 171 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 IGFL2Q6UWQ7 119 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 CYHR1Q6ZMK1 362 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 ADCK2Q7Z695 626 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 DNAJB14Q8TBM8 379 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms