RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ZNF382Q96SR6 550 aa18.49■□□□□ 0.55
PSPC1-203ENST00000471658 NTMT1Q9BV86 223 aa18.49■□□□□ 0.55
PSPC1-203ENST00000471658 SPNS1Q9H2V7 528 aa18.49■□□□□ 0.55
PSPC1-203ENST00000471658 TMEM9Q9P0T7 183 aa18.49■□□□□ 0.55
PSPC1-203ENST00000471658 ATXN7L1Q9ULK2 861 aaPredicted RBP18.49■□□□□ 0.55
PSPC1-203ENST00000471658 ENTPD2Q9Y5L3 495 aa18.49■□□□□ 0.55
PSPC1-203ENST00000471658 PCM1Q15154 2024 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 CAPN5O15484 640 aaPredicted RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 KIF1CO43896 1103 aaKnown RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 PRAMEF10O60809 474 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 WFS1O76024 890 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 OTCP00480 354 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 VIMP08670 466 aaKnown RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 C1GALT1C1LP0DN25 315 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 SERPINB3P29508 390 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 CSF2RBP32927 897 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 DUSP3P51452 185 aaPredicted RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 KLHL35Q6PF15 583 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 SPESP1Q6UW49 350 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 FAM92BQ6ZTR7 304 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 MYLK4Q86YV6 388 aaPredicted RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 ZNF740Q8NDX6 193 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 BAHD1Q8TBE0 780 aaPredicted RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 NAT6Q93015 286 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 SLC22A18Q96BI1 424 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 TGM7Q96PF1 710 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 ZNF317Q96PQ6 595 aaPredicted RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 ACTR8Q9H981 624 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 EML4Q9HC35 981 aaKnown RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 MRPS30Q9NP92 439 aaKnown RBP18.48■□□□□ 0.55
PSPC1-203ENST00000471658 POMT2Q9UKY4 750 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 FIS1Q9Y3D6 152 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 TIMM22Q9Y584 194 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 RP1P56715 2156 aa18.48■□□□□ 0.55
PSPC1-203ENST00000471658 A0A1W2PQM1 296 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 ESRRBO95718 433 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 KITP10721 976 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 HOXB3P14651 431 aaPredicted RBP18.47■□□□□ 0.55
PSPC1-203ENST00000471658 CMPK1P30085 196 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 NAA20P61599 178 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 GALNT1Q10472 559 aaPredicted RBP18.47■□□□□ 0.55
PSPC1-203ENST00000471658 TCHHL1Q5QJ38 904 aaPredicted RBP18.47■□□□□ 0.55
PSPC1-203ENST00000471658 SH2D4BQ5SQS7 431 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 CLEC6AQ6EIG7 209 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 TMPRSS9Q7Z410 1059 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 CDYL2Q8N8U2 506 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 DPH7Q9BTV6 452 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 ILKAPQ9H0C8 392 aaPredicted RBP18.47■□□□□ 0.55
PSPC1-203ENST00000471658 MARCOQ9UEW3 520 aaPredicted RBP18.47■□□□□ 0.55
PSPC1-203ENST00000471658 KLHL3Q9UH77 587 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 RAP2CQ9Y3L5 183 aa18.47■□□□□ 0.55
PSPC1-203ENST00000471658 KCNE1BA0A087WTH5 132 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 DUX1O43812 170 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 EDF1O60869 148 aaKnown RBP18.46■□□□□ 0.55
PSPC1-203ENST00000471658 CLDN9O95484 217 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 RPLP0P05388 317 aaKnown RBP18.46■□□□□ 0.55
PSPC1-203ENST00000471658 EBLN1P0CF75 366 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 GRIA3P42263 894 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 PKNOX1P55347 436 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 GPLD1P80108 840 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 PCDH1Q08174 1060 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 SF3A3Q12874 501 aaKnown RBP eCLIP18.46■□□□□ 0.55
PSPC1-203ENST00000471658 ATG9BQ674R7 924 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 PLD3Q8IV08 490 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 L3MBTL4Q8NA19 623 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 C7orf26Q96N11 449 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 MAP3K3Q99759 626 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 NUDT22Q9BRQ3 303 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 LRRN3Q9H3W5 708 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 RABEP2Q9H5N1 569 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 FGFR1OP2Q9NVK5 253 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 GEMIN8Q9NWZ8 242 aaKnown RBP18.46■□□□□ 0.55
PSPC1-203ENST00000471658 TRAF6Q9Y4K3 522 aa18.46■□□□□ 0.55
PSPC1-203ENST00000471658 FFAR3O14843 346 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 GPR42O15529 346 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 FOXD2O60548 495 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CAPN1P07384 714 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 MAGP20916 626 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ACP1P24666 158 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CASP2P42575 452 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CSNK1G2P78368 415 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ABATP80404 500 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CPSF6Q16630 551 aaKnown RBP eCLIP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 SLC5A12Q1EHB4 618 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 FCRL6Q6DN72 434 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ADCK2Q7Z695 626 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 FAM129CQ86XR2 697 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ABHD11Q8NFV4 315 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 THOC1Q96FV9 657 aaKnown RBP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 SYNDIG1Q9H7V2 258 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 EPHA6Q9UF33 1036 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 A0A0J9YY10 115 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 FEZF1A0PJY2 475 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 AZIN1O14977 448 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CCNDBP1O95273 360 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 HGFP14210 728 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ST6GAL1P15907 406 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CDH3P22223 829 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 HTR6P50406 440 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms