RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GRB7Q14451 532 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 BTBD16Q32M84 506 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 ACER2Q5QJU3 275 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 UNC5DQ6UXZ4 953 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 DOLPP1Q86YN1 238 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 GHDCQ8N2G8 530 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 FAM98AQ8NCA5 519 aaKnown RBP17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 CHDHQ8NE62 594 aaPredicted RBP17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 PHF10Q8WUB8 498 aaKnown RBP17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 SIGLEC12Q96PQ1 595 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 VKORC1Q9BQB6 163 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 ZNF559Q9BR84 538 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 KCNK13Q9HB14 408 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 SPTLC3Q9NUV7 552 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 ZNHIT6Q9NWK9 470 aaKnown RBP17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 PIH1D1Q9NWS0 290 aaKnown RBP17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 PRRC2AP48634 2157 aaKnown RBP17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 LOC102723996A0A087X1L8 192 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 FOXO6A8MYZ6 492 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 H0YGG7 62 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 APOC4-APOC2K7ER74 178 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 APOC2P02655 101 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 APOA4P06727 396 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 ARF3P61204 181 aaPredicted RBP17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 OC90Q02509 493 aaPredicted RBP17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 TUBA3CQ13748 450 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 OR1C1Q15619 314 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 SPINK14Q6IE38 97 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 TUBA3EQ6PEY2 450 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 TMEM178AQ8NBL3 297 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 OR2L3Q8NG85 312 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 IMMP1LQ96LU5 166 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 SPATA13Q96N96 652 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 ZFYVE21Q9BQ24 234 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 ACANP16112 2415 aa17.97■□□□□ 0.47
NCKIPSD-209ENST00000470006 IGHV3-20A0A0C4DH32 117 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 CCDC162PA2VCL2 907 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 GOLGA6L22H0YM25 854 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 VPS26AO75436 327 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 DNAJA1P31689 397 aaKnown RBP17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 IST1P53990 364 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 EIF3EP60228 445 aaKnown RBP17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 FASTKQ14296 549 aaKnown RBP17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 TMED2Q15363 201 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 SYT16Q17RD7 645 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 ASTE1Q2TB18 679 aaPredicted RBP17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 TMEM205Q6UW68 189 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 CLEC17AQ6ZS10 378 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 CEP128Q6ZU80 1094 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 BBS12Q6ZW61 710 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 RNF44Q7L0R7 432 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 KATNAL2Q8IYT4 538 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 CSNK1A1LQ8N752 337 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 ACBD4Q8NC06 268 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 ACTL9Q8TC94 416 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 NRGNQ92686 78 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 RAD51AP1Q96B01 352 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 MVB12AQ96EY5 273 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 GBP4Q96PP9 640 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 FAM118BQ9BPY3 351 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 TNFRSF10DQ9UBN6 386 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 TTC7AQ9ULT0 858 aaPredicted RBP17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 RUVBL1Q9Y265 456 aaKnown RBP17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 ALG6Q9Y672 507 aa17.96■□□□□ 0.47
NCKIPSD-209ENST00000470006 IQCF5A8MTL0 148 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 FAM155BO75949 473 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 SLCO2B1O94956 709 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 RBP3P10745 1247 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 CMPK1P30085 196 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 FOXN2P32314 431 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 CD96P40200 585 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 SLC26A3P40879 764 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 BDKRB1P46663 353 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 IQCB1Q15051 598 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 MEP1AQ16819 746 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 HKDC1Q2TB90 917 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 PRTGQ2VWP7 1150 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 CCDC38Q502W7 563 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 CES4AQ5XG92 561 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 FBXO42Q6P3S6 717 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 LRRC8BQ6P9F7 803 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 GALNTL5Q7Z4T8 443 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 TGIF2LYQ8IUE0 185 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 HORMAD2Q8N7B1 307 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 AMER3Q8N944 861 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 MDS2Q8NDY4 140 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 FRMD6Q96NE9 622 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 DMRTA2Q96SC8 542 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 TREX2Q9BQ50 279 aaPredicted RBP17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 DPH7Q9BTV6 452 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 ACAT2Q9BWD1 397 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 TGIF2Q9GZN2 237 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 GOLPH3Q9H4A6 298 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 ABCA4P78363 2273 aa17.95■□□□□ 0.46
NCKIPSD-209ENST00000470006 A0A0A6YYC8 382 aaPredicted RBP17.94■□□□□ 0.46
NCKIPSD-209ENST00000470006 ASPDHA6ND91 283 aa17.94■□□□□ 0.46
NCKIPSD-209ENST00000470006 FAM90A27PA6NNH2 459 aa17.94■□□□□ 0.46
NCKIPSD-209ENST00000470006 I3L1I5 382 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms