RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CLCN7P51798 805 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 PNLIPRP1P54315 467 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 EMP2P54851 167 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 PRDX1Q06830 199 aaKnown RBP12.65□□□□□ -0.38
CPSF4-210ENST00000469897 CDC16Q13042 620 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 DHX34Q14147 1143 aaKnown RBP12.65□□□□□ -0.38
CPSF4-210ENST00000469897 MUM1Q2TAK8 710 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 HKDC1Q2TB90 917 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 PRTGQ2VWP7 1150 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 TTC27Q6P3X3 843 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 ISLR2Q6UXK2 745 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 CYHR1Q6ZMK1 362 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 CILP2Q8IUL8 1156 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 DENND6AQ8IWF6 608 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 REXO1L1PQ8IX06 675 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 CSNK1A1LQ8N752 337 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 AMER2Q8N7J2 671 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 C5orf34Q96MH7 638 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 LMF1Q96S06 567 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 EPS8L2Q9H6S3 715 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 TRPC4Q9UBN4 977 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 TAC3Q9UHF0 121 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 CDC14AQ9UNH5 594 aa12.65□□□□□ -0.38
CPSF4-210ENST00000469897 RUVBL1Q9Y265 456 aaKnown RBP12.65□□□□□ -0.38
CPSF4-210ENST00000469897 LRRK2Q5S007 2527 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 IGLV3-12A0A075B6K2 115 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 MYO1CO00159 1063 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 VPS26AO75436 327 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 SYF2O95926 243 aaKnown RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 HPP00738 406 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 CATP04040 527 aaKnown RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ERGP11308 486 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ACPPP15309 386 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 HSD17B2P37059 387 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 MAGEA6P43360 314 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 CUL1Q13616 776 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 THOC5Q13769 683 aaKnown RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF169Q14929 603 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ARHGAP19Q14CB8 494 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 TLR1Q15399 786 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ICE2Q659A1 982 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF787Q6DD87 383 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 FAAH2Q6GMR7 532 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF549Q6P9A3 640 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 NDUFAF7Q7L592 441 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 MAMDC2Q7Z304 686 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 PAQR7Q86WK9 346 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 LRRC8AQ8IWT6 810 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 KBTBD2Q8IY47 623 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 TRIM58Q8NG06 486 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 OR1N1Q8NGS0 311 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF480Q8WV37 535 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 PSMF1Q92530 271 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 MAGOHBQ96A72 148 aaKnown RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 MMABQ96EY8 250 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 MS4A14Q96JA4 679 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 OR2A5Q96R48 311 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 FBXO6Q9NRD1 293 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 FAM114A2Q9NRY5 505 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 INTS10Q9NVR2 710 aaKnown RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 PLA2G3Q9NZ20 509 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 SAMD15Q9P1V8 674 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 MED16Q9Y2X0 877 aa12.64□□□□□ -0.39
CPSF4-210ENST00000469897 USP9YO00507 2555 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-210ENST00000469897 DOPEY2Q9Y3R5 2298 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-210ENST00000469897 A0A0A6YYC8 382 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-210ENST00000469897 NSG1A0A0A6YYJ2 146 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 FAM237BA0A1B0GVD1 139 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 IDSB3KWA1 339 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 E7ENX8 843 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 I3L1I5 382 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-210ENST00000469897 MAP2K7O14733 419 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 FOXS1O43638 330 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 SLC16A8O95907 504 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 HEXBP07686 556 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 SPTBP11277 2137 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 CXCR2P25025 360 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 SLC26A3P40879 764 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 TSFMP43897 325 aaKnown RBP12.63□□□□□ -0.39
CPSF4-210ENST00000469897 EMP3P54852 163 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 TAP2Q03519 686 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 MFAP5Q13361 173 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 NAA25Q14CX7 972 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 SYT16Q17RD7 645 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF470Q6ECI4 717 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF425Q6IV72 752 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 ADCK2Q7Z695 626 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 PLD3Q8IV08 490 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 GIMAP7Q8NHV1 300 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 FAR1Q8WVX9 515 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 ASB11Q8WXH4 323 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF669Q96BR6 464 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-210ENST00000469897 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
CPSF4-210ENST00000469897 PTGFRNQ9P2B2 879 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 OSGIN2Q9Y236 505 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 MED13Q9UHV7 2174 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms