RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 BBC3Q96PG8 261 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 PSKH2Q96QS6 385 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 NUDCD1Q96RS6 583 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 TIMP4Q99727 224 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 RTKNQ9BST9 563 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 DESI2Q9BSY9 194 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 KRTAP4-2Q9BYR5 136 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 FRMD8P1Q9BZ68 369 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 RAB6CQ9H0N0 254 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 TP63Q9H3D4 680 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 SYNPO2LQ9H987 977 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 HOMER3Q9NSC5 361 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 RBM22Q9NW64 420 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 KLHL8Q9P2G9 620 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 GRHPRQ9UBQ7 328 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 PILRBQ9UKJ0 227 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 NENFQ9UMX5 172 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 MFHAS1Q9Y4C4 1052 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 ATXN2Q99700 1313 aaKnown RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 SPTBN5Q9NRC6 3674 aaKnown RBP6.17□□□□□ -1.42
PTCD3-208ENST00000469585 THADAQ6YHU6 1953 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 DOCK4Q8N1I0 1966 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 NEMP2A6NFY4 417 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 E7EVH7 732 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 I6L893 689 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-208ENST00000469585 QSOX1O00391 747 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 TRIM38O00635 465 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 CES2O00748 559 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 SLC31A1O15431 190 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 INSIG1O15503 277 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 PSMD3O43242 534 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 ZW10O43264 779 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 PIP5K1CO60331 668 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 ANXA9O76027 345 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 HEXIM1O94992 359 aaKnown RBP6.17□□□□□ -1.42
PTCD3-208ENST00000469585 FTCDO95954 541 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF30P17039 623 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 HALP42357 657 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 PTGER3P43115 390 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 GRK6P43250 576 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 RABIFP47224 123 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 TAS2R40P59535 323 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 RPL26P61254 145 aaKnown RBP6.17□□□□□ -1.42
PTCD3-208ENST00000469585 SLC14A1Q13336 389 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 XRCC4Q13426 336 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 UGP2Q16851 508 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 P3H1Q32P28 736 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 TBC1D25Q3MII6 688 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 RAD9BQ6WBX8 426 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 PID1Q7Z2X4 250 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 NT5DC3Q86UY8 548 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 IQCHQ86VS3 1027 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 AADATQ8N5Z0 425 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 ARFGAP1Q8N6T3 406 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 NPWQ8N729 165 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 CCDC89Q8N998 374 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 DENND6BQ8NEG7 585 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 OR52K2Q8NGK3 314 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 OR1N1Q8NGS0 311 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 STT3BQ8TCJ2 826 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 RAPGEF5Q92565 580 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 BIRC7Q96CA5 298 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 TSGA13Q96PP4 275 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 SEMA3CQ99985 751 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 MGME1Q9BQP7 344 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 HERPUD2Q9BSE4 406 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 SLC17A9Q9BYT1 436 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 OSBPL8Q9BZF1 889 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 C6orf106Q9H6K1 298 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-208ENST00000469585 EPS8L2Q9H6S3 715 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 RXFP3Q9NSD7 469 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 LRFN1Q9P244 771 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 LPAR3Q9UBY5 353 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 RPL26L1Q9UNX3 145 aaKnown RBP6.17□□□□□ -1.42
PTCD3-208ENST00000469585 AAR2Q9Y312 384 aaKnown RBP6.17□□□□□ -1.42
PTCD3-208ENST00000469585 HYOU1Q9Y4L1 999 aa6.17□□□□□ -1.42
PTCD3-208ENST00000469585 CKAP5Q14008 2032 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 SPAG17Q6Q759 2223 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 CACNB4O00305 520 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 VILLO15195 856 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 TMPRSS11DO60235 418 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 USP1O94782 785 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PIGNO95427 931 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 JCHAINP01591 159 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 CD48P09326 243 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 CTSEP14091 401 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 TCF4P15884 667 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 WT1P19544 449 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 FPR3P25089 353 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 CDKN2BP42772 138 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 DIO1P49895 249 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 LIMK1P53667 647 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 ALDH18A1P54886 795 aaKnown RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 GEMP55040 296 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 EIF3EP60228 445 aaKnown RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PDE1BQ01064 536 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 PPIDQ08752 370 aaKnown RBP6.16□□□□□ -1.42
PTCD3-208ENST00000469585 SLC10A7Q0GE19 358 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 LAMB3Q13751 1172 aa6.16□□□□□ -1.42
PTCD3-208ENST00000469585 CYTH1Q15438 398 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms