RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ILF2Q12905 390 aaKnown RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 TGFBIQ15582 683 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 PTCHD3Q3KNS1 767 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 MANEAQ5SRI9 462 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 CATSPEREQ5SY80 951 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 C1orf189Q5VU69 101 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 CAPN13Q6MZZ7 669 aaPredicted RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 ISCA2Q86U28 154 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 BPHLQ86WA6 291 aaPredicted RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 PAQR7Q86WK9 346 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 GPSM1Q86YR5 675 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 CENPLQ8N0S6 344 aaPredicted RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 DTWD1Q8N5C7 304 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 EIF1ADQ8N9N8 165 aaKnown RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 OR56A3Q8NH54 315 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 ANKRD7Q92527 254 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 KIAA1191Q96A73 305 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 TSNARE1Q96NA8 513 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 PLCD4Q9BRC7 762 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 SGPP1Q9BX95 441 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 PARD6BQ9BYG5 372 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 SLC7A5P2Q9GIP4 190 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 ACTR5Q9H9F9 607 aaPredicted RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 DHCR7Q9UBM7 475 aaKnown RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 TBK1Q9UHD2 729 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 TLK1Q9UKI8 766 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 RNF112Q9ULX5 631 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 SLC22A14Q9Y267 594 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 MRPS18BQ9Y676 258 aaKnown RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 FREM2Q5SZK8 3169 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 ACACAQ13085 2346 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 A0A087X1B8 175 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 FEZF1A0PJY2 475 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 SMIM23A6NLE4 172 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 UBXN8O00124 270 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 KRT37O76014 449 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CCNDBP1O95273 360 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 MED26O95402 600 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CDH1P12830 882 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 SLCO1A2P46721 670 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 SERPINB9P50453 376 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ATP1A2P50993 1020 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CYP4F2P78329 520 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ZC3H12BQ5HYM0 836 aaKnown RBP11.17□□□□□ -0.62
CUX1-207ENST00000465461 WASHC2DQ5SRD0 308 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ARHGAP40Q5TG30 622 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 BROXQ5VW32 411 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ZNF425Q6IV72 752 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CYB5D1Q6P9G0 228 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ADGRD1Q6QNK2 874 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 LCTLQ6UWM7 567 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ADAMTSL2Q86TH1 951 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 THOC6Q86W42 341 aaKnown RBP11.17□□□□□ -0.62
CUX1-207ENST00000465461 GPR135Q8IZ08 494 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ESX1Q8N693 406 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 OR8K5Q8NH50 307 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 OR2W6PQ8NHA6 318 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CT55Q8WUE5 264 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 MR1Q95460 341 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 RHBDF1Q96CC6 855 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CCNL2Q96S94 520 aaPredicted RBP11.17□□□□□ -0.62
CUX1-207ENST00000465461 MACROD1Q9BQ69 325 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 SELENOSQ9BQE4 189 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 TMEM79Q9BSE2 394 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CHRNA10Q9GZZ6 450 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 NMRAL1Q9HBL8 299 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 LHX9Q9NQ69 397 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 PCMTD2Q9NV79 361 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CD274Q9NZQ7 290 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 IL17BQ9UHF5 180 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ZNF180Q9UJW8 692 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 CROTQ9UKG9 612 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 ASB1Q9Y576 335 aa11.17□□□□□ -0.62
CUX1-207ENST00000465461 SUPT3HB4E1H0 165 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 H0YGG7 62 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 GOLGA8RI6L899 631 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 ZSCAN9O15535 394 aaPredicted RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 LCMT2O60294 686 aaKnown RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 CPNE3O75131 537 aaKnown RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 KATNA1O75449 491 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 SUPT3HO75486 399 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 KRT38O76015 456 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 WDR47O94967 919 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 FKBP9O95302 570 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 CCNYL3P0C7X3 344 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 MSL3P1P0C860 447 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 TCN2P20062 427 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 ALAS2P22557 587 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 RORAP35398 523 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 DLSTP36957 453 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 HSD17B3P37058 310 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 STAT5AP42229 794 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 MAGEA12P43365 314 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 HSPA7P48741 367 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 AGTR2P50052 363 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 FOXL2P58012 376 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 ARF3P61204 181 aaPredicted RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 SNRPNP63162 240 aaKnown RBP11.16□□□□□ -0.62
CUX1-207ENST00000465461 CSNK1G2P78368 415 aa11.16□□□□□ -0.62
CUX1-207ENST00000465461 ABATP80404 500 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms